Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 55.1 bits (131), Expect = 5e-12
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 14/203 (6%)

Query: 7   LENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSI 66
           L N   N  ++   +P I   + + + G++D   IG    A  L GV     ++  I  +
Sbjct: 12  LLNGTKNRQLLALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWL 71

Query: 67  GVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLS 126
              +   ++ +++ + G  D       L   L  ++  +++ T  G  +I   I  +NLS
Sbjct: 72  LGFLRMATTGLVAQAYGAND-------LNAQLKLLVQGAMLATGLGIAVILLQIPILNLS 124

Query: 127 KNL-------ESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNII 179
            +L       E Y   Y ++ +      +  + +   L     PK +M  L   +V NII
Sbjct: 125 LSLSEASVEVERYCREYFQVRVWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANII 184

Query: 180 LDYMLIVVFNFGVMGAAAATVLA 202
           LD + ++ F + V GAA A+V A
Sbjct: 185 LDVLFVIGFGWDVKGAALASVCA 207



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 34/176 (19%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 267 GSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHGAKKFNRVFEILKKAVFVNAIL 326
           G +L  +   ++I++  FL M   G       L++  +GA   N   ++L +   +   L
Sbjct: 57  GVALGSTIITLIIWLLGFLRMATTG-------LVAQAYGANDLNAQLKLLVQGAMLATGL 109

Query: 327 GICSFLTILKFPNLLIKIFNPHDTNLIATTTIGLEIHNFAILIMGVSMVLMMYFLATEQP 386
           GI   L  +   NL + + +     +        ++  ++     +++V++ + L  +QP
Sbjct: 110 GIAVILLQIPILNLSLSL-SEASVEVERYCREYFQVRVWSTPFALLNLVMLGWLLGRQQP 168

Query: 387 KIAGF-LSLGRTLIFILPAIILLPIYLGIKGIWWATVFSEYLSFIITIYFITKEFK 441
           K A + L        IL  + ++     +KG   A+V ++  +F + +Y + ++ K
Sbjct: 169 KAAMWQLIFANVANIILDVLFVIGFGWDVKGAALASVCADITAFSVALYMVLQQLK 224