Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (270), Expect = 4e-28
 Identities = 111/453 (24%), Positives = 202/453 (44%), Gaps = 37/453 (8%)

Query: 1   MKQVKKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVL 60
           MK    L +  I  +++   +P++ G + I  + + D  FI + +G E LA ++F+FPV 
Sbjct: 1   MKDRHGLLSAPIGRVLLNMSLPNLIGIMTILGFSLADTFFISQ-LGTEALAAISFTFPVT 59

Query: 61  IAISSIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVI 120
           + ISSI + IGAG S  +   +G  +  +A   L  AL    ++   ++  G + I P+ 
Sbjct: 60  LIISSIAIGIGAGVSTNLGRLIGSGNAPRAKVFLHDALLLTFILIASLSALGSIFIKPLF 119

Query: 121 SFMNLSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIIL 180
           S +  +      +  Y     +GA   +  +  +  LR+ G  +   +I+AL ++ N+IL
Sbjct: 120 SLLGANDTSLPLIHDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMALAAIINLIL 179

Query: 181 DYMLIVVFNFG------VMGAAAATVLAQGL-----GSILYLKHFLSGKSNVKIGKNSPF 229
           D +LI  F  G      + GAA AT+ +  +     G +L +K  +   +   I +    
Sbjct: 180 DPLLI--FGIGPFPRLEIQGAAIATLFSWLIALSLSGYLLIIKRNMLEWAAFDIDRMR-- 235

Query: 230 LEFSLIKRIAK-TGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMV 288
             +S +  IA+       I  LA  ++M +     + +     V+A+G    + S L +V
Sbjct: 236 ANWSKLAHIAQPAALMNLINPLANAVIMAM-----LAHIDHSAVAAFGAGTRLESVLLIV 290

Query: 289 YLGISEGVQPLISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPH 348
            + +S  + P I+ N GA +  R      K   + ++  I  F T+L  P   +  F   
Sbjct: 291 VMALSSSLMPFIAQNLGAGQTQRA-----KQALLLSLKFIFVFQTLLYIP---LAFFAQP 342

Query: 349 DTNLIATTTIGLEIHNFAILI-------MGVSMVLMMYFLATEQPKIAGFLSLGRTLIFI 401
             +L +T    LE  +F IL+       +G+ ++      A  +P  +  ++L R ++ +
Sbjct: 343 LAHLFSTDPQVLEWLSFYILVLPCAYGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLM 402

Query: 402 LPAIILLPIYLGIKGIWWATVFSEYLSFIITIY 434
           LP   L     G+KG+  A   +  L  I   Y
Sbjct: 403 LPLAALGSYIDGVKGLLLALPITNLLMGIACYY 435