Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 453 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 68/321 (21%), Positives = 141/321 (43%), Gaps = 19/321 (5%)

Query: 22  PSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAIISIS 81
           P    T++  + GI D IF+        +A V  +  ++  +  + +M+  G+S +IS +
Sbjct: 20  PIFIETLLQSLLGISD-IFMLSHYSDNAVAAVGLTTQLMFFMMVMSMMVSTGASILISQN 78

Query: 82  LGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKNLESYVVGYSKIII 141
            G    ++A+ I   ++   + +++++    +     +IS   L   +  Y   Y  I  
Sbjct: 79  NGAGQTQQATDIGVASVALSLGLAVVMGASMFFGAHGIISLFALEPEVAGYGNDYLLICG 138

Query: 142 LGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV----VFNFGVMGAAA 197
             +I  +  I+   ILR+ GF + +M++ +   + N++ +Y+ +     +  +GV G A 
Sbjct: 139 SLSIGLVMNIAFAAILRSYGFTRSAMLVTSSTGLMNVLGNYIALYSPFGLPVYGVTGVAI 198

Query: 198 ATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAKTGFSPFIMELAFGILMI 257
           +TV +Q +G+++ L            G   P L   L+ R   T +S   + L     M+
Sbjct: 199 STVTSQIIGALIMLAVIRHK------GIPLPMLRLKLLPR--STYWSVMRIGLLNAGEML 250

Query: 258 VHN------IQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHGAKKFNR 311
            +N      I F+    +L ++AY   + I+ F+Y   + + +  Q    Y  G + F+ 
Sbjct: 251 SYNVAQMTIIYFISQMGTLSLTAYTYGLNISRFIYCFAVALGQAAQIQTGYYVGKQWFDE 310

Query: 312 VFEILKKAVFVNAILGICSFL 332
           +   ++K   V  I  +   L
Sbjct: 311 ITGRVQKYCLVGFITSLAIVL 331