Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 462 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Pseudomonas fluorescens FW300-N2E2

 Score =  239 bits (610), Expect = 1e-67
 Identities = 131/346 (37%), Positives = 201/346 (58%), Gaps = 5/346 (1%)

Query: 14  LTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYT 73
           LTVS+LN   +  LE+ F      ++GEISN     SGHVYFTLKD  + + C +F+   
Sbjct: 19  LTVSQLNGRARVLLEDVF--SNIWVEGEISNLARPASGHVYFTLKDSGAQVRCALFRQNA 76

Query: 74  KKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLF 133
            ++  +  +G++V ++GKVSL+   G YQ   + +E  G G L + F  LKEKL +EGLF
Sbjct: 77  ARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFDALKEKLSAEGLF 136

Query: 134 NEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTVIS 193
           + E K  +P +P+ IGII+SPTGA IRDII V R R   + L + P  VQG  A   ++ 
Sbjct: 137 SAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQIALTLIPTAVQGREATAQIVR 196

Query: 194 GISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTISDF 253
            + +L      D +I+ARGGGS+EDLWCFN E++ARA+     P+++ +GHETD +ISDF
Sbjct: 197 AL-KLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSAVGHETDVSISDF 255

Query: 254 VSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIEKNS 313
           V+D+RA TPS AAE+   +  +L   + +L R L  RM+  +      L+ L  ++    
Sbjct: 256 VADVRAPTPSAAAELLAPDAGDLVRRVESLHRRLVMRMRDRLMRDQLRLEGLTRRL--RH 313

Query: 314 PKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNP 359
           P  ++ +Q   +D +  ++    +  ++   +R  +  + L   +P
Sbjct: 314 PGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHP 359