Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 468 a.a., Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) from Pseudomonas fluorescens FW300-N1B4

 Score =  244 bits (623), Expect = 4e-69
 Identities = 144/433 (33%), Positives = 225/433 (51%), Gaps = 46/433 (10%)

Query: 14  LTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYT 73
           LTVS+LN   +  LE+ F      ++GEISN     SGHVYFTLKD  + + C +F+   
Sbjct: 25  LTVSQLNGRARVLLEDVF--SNIWVEGEISNLARPASGHVYFTLKDSGAQVRCALFRQNA 82

Query: 74  KKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLF 133
            ++  +  +G++V ++GKVSL+   G YQ   + +E  G G L + F  LKEKL +EGLF
Sbjct: 83  ARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFDALKEKLSAEGLF 142

Query: 134 NEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTVIS 193
           + E K  +P +P+ IGII+SPTGA IRDII V R R   + L + P  VQG  A   ++ 
Sbjct: 143 SAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQIQLTLIPTAVQGREATAQIVR 202

Query: 194 GISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTISDF 253
            + +L      D +I+ARGGGS+EDLWCFN E++ARA+     P+++ +GHETD +ISDF
Sbjct: 203 AL-KLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSAVGHETDVSISDF 261

Query: 254 VSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEI------------------ 295
           V+D+RA TPS AAE+   +  +L   + +L R L  RM+  +                  
Sbjct: 262 VADVRAPTPSAAAELLAPDSSDLVRRVESLHRRLVMRMRDRLMRDRLRLEGISRRLRHPG 321

Query: 296 ------SNRSYELDI-------------------LYSKIEKNSPKSKIEKQKVHVDKIRA 330
                 + R  +LD+                   L +++    P  ++   +  +D +  
Sbjct: 322 ERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAGQHPGRQLAMLRQRLDSLAE 381

Query: 331 QMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKSSLNLENDV 390
           ++   ++  +     + +     L+  +PL  L +GYSI+ DE    I S +  +    +
Sbjct: 382 RLPRAMREGLKSRRLQLQSQMQTLHVVSPLATLARGYSILLDERGNAIRSAAQTHTGQRL 441

Query: 391 KITLKDGTVDAHI 403
           K  L +G +   +
Sbjct: 442 KAKLGEGELQVRV 454