Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  263 bits (673), Expect = 6e-75
 Identities = 136/391 (34%), Positives = 241/391 (61%), Gaps = 4/391 (1%)

Query: 12  NTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKP 71
           N  TVS LNS V+  LE +  +    + GEISN +   SGH Y TLKD  + + C MFK 
Sbjct: 9   NIYTVSRLNSEVRLLLENEMGI--VWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFKG 66

Query: 72  YTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEG 131
             + ++F P  G  V++K ++SLY   G YQ     M+ EG G L  +F++LK +L +EG
Sbjct: 67  NNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAEG 126

Query: 132 LFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTV 191
           LF +  K+ +P+ P+ +GIITS TGAA+ DI+ V + R+ ++ ++IYP +VQGE AA  +
Sbjct: 127 LFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQI 186

Query: 192 ISGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTIS 251
              I   N   + D++I+ RGGGS+EDLWCFN+E +AR I  S+ P+I+ +GHE D TI+
Sbjct: 187 AQAIGRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTIA 246

Query: 252 DFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIEK 311
           DFV+D+RA TPS AAE+   +    +  ++  +  L + M+  ++ +  +   L  K++K
Sbjct: 247 DFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQHKLDK 306

Query: 312 NSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVL-NKGYSII 370
             P++++E+Q+  +D++  ++  +++ +++ + +R+++    +  ++P++++  + +++I
Sbjct: 307 QHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFNLI 366

Query: 371 QDENEKIISSKSSLNLENDVKITLKDGTVDA 401
           Q E ++I  S     +++  ++ L    +DA
Sbjct: 367 QQE-QRINQSIQRYLIQSRHQLALLSEKLDA 396