Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 447 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella amazonensis SB2B

 Score =  252 bits (643), Expect = 2e-71
 Identities = 144/439 (32%), Positives = 234/439 (53%), Gaps = 49/439 (11%)

Query: 11  SNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFK 70
           ++  TVS LN  V+  LE    L R  + GEISN +   SGH Y TLKD +S + C MFK
Sbjct: 6   NDVYTVSRLNGEVRQLLEGQ--LGRIWLTGEISNFSSPSSGHWYLTLKDSHSQLRCAMFK 63

Query: 71  PYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESE 130
                + F P  G  V+++G +S+Y   G YQ     M   G G L  +F+ LK KL +E
Sbjct: 64  GRNTTVAFKPINGQQVLVRGSISVYEPRGDYQLLIEAMFPAGDGLLAAQFEALKMKLAAE 123

Query: 131 GLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKT 190
           GLF ++ K+ +P+  + IG+ITSPTGAAIRD++ V + R+ SV ++IYP  VQG  A K 
Sbjct: 124 GLFAQDTKRPLPESIQRIGVITSPTGAAIRDVLHVLKRRDPSVEVVIYPTAVQGTGADKD 183

Query: 191 VISGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTI 250
           +I  I   N+  ++D++++ RGGGS+EDLWCFN+E+LA AI+ S   +++ +GHE D +I
Sbjct: 184 IIRAIELANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHAIYNSTLTIVSAVGHEVDTSI 243

Query: 251 SDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIE 310
           +DFV+D+RA TPS  AE+   ++   +  +      L    +     R   L  L S+++
Sbjct: 244 ADFVADVRAPTPSAGAELLSGDQSHKQQKLAGALARLTQGWRHYALKRHSGLISLQSRLD 303

Query: 311 KNSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEK--------------------- 349
           +  PK ++++Q   +D++  ++   I+ ++S      E+                     
Sbjct: 304 RQDPKRQLQQQSQRLDELELRLTSSIQRRLSSHTLTTERLKARLERHSPAQRLMMEQQRL 363

Query: 350 -------------------------SYSLLNAYNPLNVLNKGYSIIQDENEKIISSKSSL 384
                                    S+SL +  +PL  L++GYSI +D   ++++  SS+
Sbjct: 364 TYLDERLKGAMEDRLEDAQTHLGGLSHSLASV-SPLATLSRGYSITRDAGGRVLTQASSM 422

Query: 385 NLENDVKITLKDGTVDAHI 403
              + ++  L+ G++ A +
Sbjct: 423 KTGDTIETQLEQGSLLARV 441