Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 537 a.a., Exodeoxyribonuclease VII (NCBI) from Rhodospirillum rubrum S1H

 Score =  192 bits (487), Expect = 3e-53
 Identities = 108/273 (39%), Positives = 163/273 (59%), Gaps = 9/273 (3%)

Query: 14  LTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKPYT 73
           L+VSEL+  +K T+EE F   R  ++GEIS   +  SGH Y  LKD+ + ID ++++   
Sbjct: 15  LSVSELSGALKRTIEEAF--SRVRVRGEISQPKVAGSGHCYLRLKDDQAVIDAIIWRGTM 72

Query: 74  KKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEGLF 133
            KL   P EG+ VI  G+++ Y     YQ     +E  G G L    ++ + +L +EGLF
Sbjct: 73  AKLALRPEEGLEVIAIGRLTTYPGRSSYQIVIESLELAGEGALLKMLEERRRRLAAEGLF 132

Query: 134 NEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKTVIS 193
           +   K++ P  P  IG+ITSPTGA IRDI+    +R     ++++P  VQGE AA  + +
Sbjct: 133 DAGRKRRPPFLPSVIGVITSPTGAVIRDILHRLADRFPR-PVLVWPVAVQGEGAAAQIAA 191

Query: 194 GISELNKL------EKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETD 247
            I+  N L       + D++I+ARGGGS+EDL  FN+E++ RA   S  P+I+ +GHETD
Sbjct: 192 AITGFNALPAGGPVPRPDVLIVARGGGSLEDLMAFNDEAVVRAASASAIPLISAVGHETD 251

Query: 248 FTISDFVSDLRAATPSNAAEIAIYNEYELKSMI 280
            T+ D  +DLRA TP+ AAE+A+    +L + +
Sbjct: 252 TTLIDHAADLRAPTPTGAAEMAVPVRLDLLAQV 284



 Score = 28.5 bits (62), Expect = 5e-04
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 362 VLNKGYSIIQDENEKIISSKSSLNLENDVKITLKDGTVDAHI 403
           VL +GY++++D    I+ +   L   + V +  +DG V A I
Sbjct: 452 VLERGYAVVRDATGAIVPAARGLTKGDGVVLDFRDGRVAATI 493