Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 442 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella loihica PV-4

 Score =  251 bits (642), Expect = 2e-71
 Identities = 133/370 (35%), Positives = 217/370 (58%), Gaps = 2/370 (0%)

Query: 11  SNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFK 70
           +N  TVS LN  V+  LE +  L +  ++ EISN +   SGH Y TLKD  + I   MFK
Sbjct: 6   NNVYTVSRLNGEVRQLLEGE--LGKVWLEAEISNFSAPSSGHWYLTLKDNYAQIRAAMFK 63

Query: 71  PYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESE 130
              + + F PA G  V++KG +S+Y   G YQ   + M   G G L  +++ LK KL +E
Sbjct: 64  GRNRAVTFRPANGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKLAAE 123

Query: 131 GLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKT 190
           GLF  + K+ +P   + IG++TS TGAAIRD++ V + R+ S+ +IIYP+ VQGE A K+
Sbjct: 124 GLFAADTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADKS 183

Query: 191 VISGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTI 250
           +   I + N   ++D++++ RGGGS+EDLWCFN+E+LA  I+ S  PV++ +GHE D TI
Sbjct: 184 LCHAIMQANDRMEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTTI 243

Query: 251 SDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIE 310
           SD+V+DLRA TPS AAE+   +       +      LK   +     ++     L+ ++E
Sbjct: 244 SDYVADLRAPTPSAAAELLSQDALSKADKLRMTMTRLKQGWQHYGLKQAQRFSQLHHRLE 303

Query: 311 KNSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSII 370
           +  PK ++++ +   D+++ ++   +  K+    +R +  ++ LN  +P + L    S +
Sbjct: 304 RQDPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLALAASRL 363

Query: 371 QDENEKIISS 380
             +N+++ S+
Sbjct: 364 THQNQRLHSA 373