Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 445 a.a., exodeoxyribonuclease VII, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  259 bits (663), Expect = 8e-74
 Identities = 152/439 (34%), Positives = 234/439 (53%), Gaps = 47/439 (10%)

Query: 11  SNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFK 70
           +N  TVS LN  V+  LE    L +  + GEISN +   SGH Y TLKD  S I C MFK
Sbjct: 6   NNIYTVSRLNGEVRQILEGQ--LGKIWLNGEISNFSTPSSGHWYLTLKDHFSQIRCAMFK 63

Query: 71  PYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESE 130
              + + F P  G  VI+KG +S+Y   G YQ     M   G G L  +F+ LK KL + 
Sbjct: 64  GRNQSVSFKPVNGQQVIVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAL 123

Query: 131 GLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKT 190
           GLF  + K+ +PK  + IG+ITSPTGAAIRD++ V   R+ S+ +IIYP  VQGE+A   
Sbjct: 124 GLFAADTKRALPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADIN 183

Query: 191 VISGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTI 250
           +   I+  N+  ++D++++ RGGGS+EDLWCFN+E+LA  I+ S  P+++ +GHE D TI
Sbjct: 184 ICQAINIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAVGHEVDTTI 243

Query: 251 SDFVSDLRAATPSNAAEI--------------------------AIYNEYELKSMINNLE 284
           SD+V+D+RA TPS  AE+                           +  E  L  + + L+
Sbjct: 244 SDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLARLKQSASHYQLKQERRLSLLEHRLQ 303

Query: 285 RMLKNRMKTEISNRSYELDI-------------------LYSKIEKNSPKSKIEKQKVHV 325
           R+   R   +   R  E+ +                   L S++E+ SPK K+  +   +
Sbjct: 304 RLDPKRTLQQFEQRFDEMQLRLEAALTNKLHGLSRRQQQLASRLEQQSPKHKLALEANRL 363

Query: 326 DKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKSSLN 385
             +  ++   +++K+S+  +R +     L   +PL  L++GYSI  D N  +I+S S ++
Sbjct: 364 SYLATRLQDAMQDKLSHSGQRIKYVAHQLETVSPLATLSRGYSITTDVNGAVITSASQIS 423

Query: 386 LENDVKITLKDGTVDAHIT 404
           L + +   L +  + + +T
Sbjct: 424 LGDTITTQLSNERLMSTVT 442