Pairwise Alignments

Query, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis S2

Subject, 448 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  264 bits (674), Expect = 4e-75
 Identities = 150/439 (34%), Positives = 240/439 (54%), Gaps = 47/439 (10%)

Query: 11  SNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFK 70
           +N  TVS LN  V+  LE    L +  + GEISN +   SGH Y TLKD  S I C MFK
Sbjct: 6   NNIYTVSRLNGEVRQILEGQ--LGKVWLNGEISNFSAPSSGHWYLTLKDHYSQIRCAMFK 63

Query: 71  PYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESE 130
              + + F P  G  V++KG +S+Y   G YQ     M   G G L  +F+ LK KL ++
Sbjct: 64  GRNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQ 123

Query: 131 GLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGESAAKT 190
           GLF  + K+++PK  + IG+ITSPTGAAIRD++ V   R+ S+ +IIYP  VQGE+A   
Sbjct: 124 GLFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADMN 183

Query: 191 VISGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVITGIGHETDFTI 250
           +   I+  N+  ++D++++ RGGGS+EDLWCFN+E+LA  I+ S  PV++ +GHE D TI
Sbjct: 184 ICQAINIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTTI 243

Query: 251 SDFVSDLRAATPSNAAEI--------------------------AIYNEYELKSMINNLE 284
           SD+V+D+RA TPS  AE+                           +  E  L  + + L+
Sbjct: 244 SDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQEKRLSLLEHRLQ 303

Query: 285 RM---------------LKNRMKTEISNRSYEL----DILYSKIEKNSPKSKIEKQKVHV 325
           R+               ++ R++  +SN+ + L      L +++E+ SPK K+  +   +
Sbjct: 304 RLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEQQSPKHKLALETNRL 363

Query: 326 DKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKSSLN 385
             +  ++   +++ ++   +R   +   L   +PL  L++GYSI  D N ++I + + L+
Sbjct: 364 SYLATRLQDAMQDTLNQSEQRITYAAHQLETVSPLATLSRGYSITTDANNQVIDNAAQLS 423

Query: 386 LENDVKITLKDGTVDAHIT 404
           + + +   L+ G V + +T
Sbjct: 424 VGDKINTRLRHGQVQSTVT 442