Pairwise Alignments

Query, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

Subject, 607 a.a., Excinuclease ABC subunit C from Pseudomonas syringae pv. syringae B728a

 Score =  292 bits (747), Expect = 3e-83
 Identities = 180/540 (33%), Positives = 299/540 (55%), Gaps = 37/540 (6%)

Query: 11  PGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIVTDNEVEA 70
           PG Y   +   T++YVGKAKNLKKR++SYF K  H PKT  LV  I ++E  +T NE EA
Sbjct: 18  PGVYRMFDAEATLLYVGKAKNLKKRLASYFRKTGHAPKTGALVSRIAQIETTITGNETEA 77

Query: 71  LILENTLIKKYSPKYNIDLKDSKNYAYIYISEENFPRIGISR-NKSKKGKFYGPFTSAKE 129
           L+LE TLIK++ P YNI L+D K+Y Y+++S+  FPR+ I R  K  KG+++GP+ SA  
Sbjct: 78  LLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDNAFPRLSIHRGTKKAKGRYFGPYPSAGA 137

Query: 130 RDYVLDVLKKTFKIRSCKNMH----KRPCLRHHIKNCTAPCSGDITSKDYLNQIKKAEHI 185
               L +L+KTF++R C++ +     RPCL++ IK C  PC G +  + Y   ++ +   
Sbjct: 138 IRESLSLLQKTFQVRQCEDSYFKNRTRPCLQYQIKRCKGPCVGLVEPEVYAEDVRHSVMF 197

Query: 186 LKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVKYNEDVISI 245
           L+G  ++L  EL   M + +  L FE A  +R+++  + R++ +Q++      + DV++ 
Sbjct: 198 LEGRSNALSDELNASMEKAAMALDFERAAELRDQVALLRRVQDQQSMDGGTG-DVDVVAA 256

Query: 246 LEKSGKLHIMVFNVLKGTLFDRKYF--EFDYTENFFE---EFLIQYY---SENDVPSEII 297
               G   + + +V  G +   K F  +    E   E    FL QY+    + ++P E+I
Sbjct: 257 FVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVGEVMSAFLAQYFLGGIDRELPGEVI 316

Query: 298 ISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIKNLEIYVNGN 357
           ++ +       N+++   A ++ + + +G ++      +G + +   +A+ N E  +   
Sbjct: 317 VNVI-------NDDF--PAFVDAVEELRGVEMVISHRVRGTRARWQQMAVTNAEQALTAR 367

Query: 358 -------EIKVQSLKNKLMLDKSPNIIECFDISHLSGTSTVGSVVQFRNGKPDKKNYRRF 410
                    + ++L   L L+  P  +EC+DISH SG +TV S V F    P K +YRRF
Sbjct: 368 LANRQHVASRFEALAKVLGLEDPPMRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRF 427

Query: 411 KIKTVSGIDDFKSISEVVFRRYSKLLEENLELPDLIIIDGGKGQLSSAFSELRKLKL-KI 469
            I+ V+  DD+ ++ + + RRYS++     +LPD++++DGGKGQ+S A   L +L++ ++
Sbjct: 428 NIEGVTAGDDYAAMHQALTRRYSRIKAGEGKLPDVLLVDGGKGQMSMARDVLNELQVPEL 487

Query: 470 PLISIAKRE------EEIYTPGIENPLPIKKNEKASLFIQEIRDEAHRFAINYNRLLRKK 523
            L+ +AK        E +Y     +   +  +  A   IQ+IRDEAHRFAI  +R  R K
Sbjct: 488 ILLGVAKGTTRKAGFETLYLNDSAHEFTLPGDSPALHLIQQIRDEAHRFAITGHRARRGK 547