Pairwise Alignments

Query, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

Subject, 629 a.a., uvrABC system protein C from Phaeobacter inhibens DSM 17395

 Score =  278 bits (712), Expect = 3e-79
 Identities = 177/554 (31%), Positives = 304/554 (54%), Gaps = 43/554 (7%)

Query: 4   ISDIPKNPGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIV 63
           +  +  +PG Y   +    V+YVGKA+NL+ RVS+Y ++  H P+ E+++ +   M F+ 
Sbjct: 28  LKTLDSSPGVYRMLDSESRVLYVGKARNLRARVSNY-SRPGHSPRIERMIAATASMMFLT 86

Query: 64  TDNEVEALILENTLIKKYSPKYNIDLKDSKNYAYIYISEEN-FPRIGISRN-KSKKGKFY 121
           T  E EAL+LE  LIK+  PKYN+ L+D K++  I +++++ FP+I   R  + +KG ++
Sbjct: 87  TRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAKDHAFPQIKKHRGTRREKGSYF 146

Query: 122 GPFTSAKERDYVLDVLKKTFKIRSCKNM----HKRPCLRHHIKNCTAPCSGDITSKDYLN 177
           GPF SA   +  L+ L+K F +R+C N       RPCL++ IK CTAPC+G+I+++DY +
Sbjct: 147 GPFASAGAVNRTLNQLQKAFLLRNCTNAMFESRTRPCLQYQIKRCTAPCTGEISAEDYAS 206

Query: 178 QIKKAEHILKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVK 237
            ++ AE  L G    +  EL  +M   S+ ++FE A  +R+ I A+ +++T Q +     
Sbjct: 207 SVRDAERFLSGRSTKIQEELAEQMAAASEAMEFERAAALRDRIKALTQVQTSQGINPRGV 266

Query: 238 YNEDVISILEKSGKLHIMVFNVLKGTLFDRKYF----EFDYT-ENFFEEFLIQYYSENDV 292
              DVI +   SG+  + VF +     +  + F      D +     E F+ Q+Y   + 
Sbjct: 267 AEADVIGLHLDSGQACVQVFFIRANQNWGNQDFYPRINGDVSPAEVMEAFIGQFYDNKEP 326

Query: 293 PSEIIISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIKNL-- 350
           P ++I+S+  +N          D + + LS K G +V   +P++GEK +L+  A++N   
Sbjct: 327 PRQLILSDEIEN---------GDLMEQALSDKAGRRVEILVPQRGEKTELVAGAVRNARE 377

Query: 351 ----EIYVNGNEIK-VQSLKNKLMLDKSPNIIECFDISHLSGTSTVGSVVQFRNGKPDKK 405
                +  +  + K ++ +     L+  P  IE +D SH+ G+  VG ++        K 
Sbjct: 378 SLARRMAESATQAKLLRGVAEAFGLEGPPQRIEVYDNSHIQGSHAVGGMIVAGPEGFMKN 437

Query: 406 NYRRFKIK--TVSGIDDFKSISEVVFRRYSKLLEENLE-----LPDLIIIDGGKGQLSSA 458
            YR+F I+   ++  DDF  + EV+ RR+S+LL+E+ +      PDL++IDGG GQ+S+ 
Sbjct: 438 AYRKFNIRGDDLTPGDDFGMMKEVLNRRFSRLLKEDPDREKGLWPDLLLIDGGAGQVSAV 497

Query: 459 FSELRKLKLK-IPLISIAK------REEEIYTPGIENPLPIKKNEKASLFIQEIRDEAHR 511
              + +  ++ IP+I +AK       +EE +  G      +++N+    F+Q +RDEAHR
Sbjct: 498 AEIMAEHGVQDIPMIGVAKGVDRDHGKEEFHRLGAP-AFALQRNDPVLYFVQRMRDEAHR 556

Query: 512 FAINYNRLLRKKEL 525
           FAI  +R  R K +
Sbjct: 557 FAIGTHRAKRAKAM 570