Pairwise Alignments

Query, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

Subject, 610 a.a., excinuclease ABC subunit C from Klebsiella michiganensis M5al

 Score =  273 bits (699), Expect = 1e-77
 Identities = 191/554 (34%), Positives = 287/554 (51%), Gaps = 47/554 (8%)

Query: 4   ISDIPKNPGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIV 63
           +  +   PG Y   +  GTVIYVGKAK+LKKR+SSYF       KTE LV  I +++  V
Sbjct: 11  LKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVALIAQIDVTV 70

Query: 64  TDNEVEALILENTLIKKYSPKYNIDLKDSKNYAYIYISEENFPRIGISRN-KSKKGKFYG 122
           T  E EAL+LE+  IK Y P+YN+ L+D K+Y +I++S +  PR+   R  K  KG+++G
Sbjct: 71  THTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLATHRGAKHAKGEYFG 130

Query: 123 PFTSAKERDYVLDVLKKTFKIRSCKNM----HKRPCLRHHIKNCTAPC-SGDITSKDYLN 177
           PF +       L +L+K F IR C+N       RPCL++ I  C  PC +G ++ ++Y  
Sbjct: 131 PFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVAGLVSEEEYAQ 190

Query: 178 QIKKAEHILKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVK 237
           Q+      L G  D ++ +L   M + S+ L+FEEA  IR++I A+ R+  +Q V  +  
Sbjct: 191 QVDYVRLFLAGKDDQVLTQLIARMEKASQALEFEEAARIRDQIQAVRRVTEKQFVS-NTG 249

Query: 238 YNEDVISILEKSGKLHIMVFNVLKG-TLFDRKYFE--------FDYTENFFEEFLIQYYS 288
            + DVI +   +G   + V  + +G  L  R YF          +  E F  +F +Q   
Sbjct: 250 DDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPNGTELGEVVETFVGQFYLQGSQ 309

Query: 289 ENDVPSEIIISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIK 348
              +P EI++         D N      L + LS+  G +V  +   +G++ + L LA  
Sbjct: 310 MRTLPGEILL---------DFNLGDKTLLADSLSELAGRRVNVQTKPRGDRARYLKLART 360

Query: 349 N----LEIYVNGNEIKVQSLKNKLMLDKSP--NIIECFDISHLSGTSTVGSVVQFRNGKP 402
           N    L   ++ +    Q L+    L K P  N +ECFDISH  G  TV S V F +  P
Sbjct: 361 NAATALTTKISQHSTITQRLRALATLLKLPAVNRMECFDISHTMGEQTVASCVVFDSNGP 420

Query: 403 DKKNYRRFKIKTVSGIDDFKSISEVVFRRYSKLLEENLELPDLIIIDGGKGQLSSAFSEL 462
            +  YRR+ I  ++  DD+ ++++V+ RRY K +EEN ++PD+I+IDGGKGQL  A +  
Sbjct: 421 LRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEEN-KIPDVILIDGGKGQLGQAKAVF 479

Query: 463 RKL-----KLKIPLISIAKREEEIYTPGIENPLPIKKNEKASL--------FIQEIRDEA 509
            +L     K    L+ +AK  +     G+E      + E  SL         IQ IRDE+
Sbjct: 480 AELDVPWDKNHPLLLGVAKGSDR--KAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDES 537

Query: 510 HRFAINYNRLLRKK 523
           H  AI  +R  R K
Sbjct: 538 HDHAITGHRKKRAK 551