Pairwise Alignments

Query, 646 a.a., excinuclease ABC subunit UvrB from Methanococcus maripaludis S2

Subject, 1198 a.a., transcription-repair coupling factor Mfd from Dechlorosoma suillum PS

 Score = 50.4 bits (119), Expect = 5e-10
 Identities = 26/118 (22%), Positives = 52/118 (44%)

Query: 138 DVIIVASVSCIYGLGNPELFKEMGFELKVGEKIKRSDIIEKLVDIQYERNDMELVPGRFR 197
           +V++V + + +Y L  P       F LK GEK+       +L    Y      + PG + 
Sbjct: 163 EVLLVPATTAVYRLTPPSYLAAYTFFLKKGEKLDAEQFRSQLTLAGYTHVTQVVSPGEYS 222

Query: 198 VKGDTLDIIPGYQDDILRVEMFGDEIDRIYELDPKNMSKKHEIDSFYMYPAKHFVIPE 255
           ++G  +D+ P       R+++F +EI+ +   D       + +    + PA+ F + +
Sbjct: 223 IRGGLVDLFPMGSALPYRIDLFDEEIETLRTFDADTQRSLYPVPEIRLLPAREFPLDD 280