Pairwise Alignments

Query, 646 a.a., excinuclease ABC subunit UvrB from Methanococcus maripaludis S2

Subject, 1234 a.a., Probable transcription-repair coupling factor Mfd (TRCF) from Mycobacterium tuberculosis H37Rv

 Score = 49.7 bits (117), Expect = 8e-10
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 2/124 (1%)

Query: 140 IIVASVSCIYGLGNPELFKEMGFELKVGEKIKRSDIIEKLVDIQYERNDMELVPGRFRVK 199
           ++V SV  +     P+L       L VG++     ++ +LV++ Y R DM    G F V+
Sbjct: 132 VVVTSVRSLLQPMTPQLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVR 191

Query: 200 GDTLDIIPGYQDDILRVEMFGDEID--RIYELDPKNMSKKHEIDSFYMYPAKHFVIPEED 257
           G  LDI     +  +RVE +GDEI   R++ +  +    + +I +   +  +  ++ E+ 
Sbjct: 192 GGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPEIDIHTLVAFACRELLLSEDV 251

Query: 258 KKNA 261
           +  A
Sbjct: 252 RARA 255