Pairwise Alignments

Query, 175 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 404 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 35/194 (18%)

Query: 3   IIFAGIF-GRYYCGFICPINTIIHPIQVLKDKAGFSSKNIPNFLKSEKPRLLLMLLFILG 61
           +I  G+   R +CG+ CP+      +  L+ +  F  + +      + P  +L  L + G
Sbjct: 154 VILTGLLCKRAFCGWACPLGLAGEYLYKLRKR--FIKRELLPPAWLDWPLRMLKYLLLAG 211

Query: 62  LGITVNAMINGS-------------RFPLPIIIISIGVLTTLLF---------NENSWHR 99
           L   V  M + S                + +  ++ G++T   F             + R
Sbjct: 212 LLYIVLGMPSASIPHYLEGNYHKIADLKMALFFVTPGLITLACFAVILLLAAWRRQGFCR 271

Query: 100 YLCPWGFLLGITGHFSKYGLN-------VNEKCISCKICENVCPAEAVKVENKQNAEIFK 152
           Y+CP+G LLG+T   S + +        +  K ++C  C   CPA  +KV   Q   +  
Sbjct: 272 YICPYGALLGLTSFLSPFKIRRSTQHCLIETKGMNCDKCTRACPAN-IKVH--QQGTVRS 328

Query: 153 KHCLLCLKCELKCP 166
             C  C++C   CP
Sbjct: 329 DECQACMRCVSACP 342



 Score = 23.1 bits (48), Expect = 0.006
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 5/39 (12%)

Query: 76  PLPIIIISIGVLTTLLFNENSWHRYLCPWGFLLGITGHF 114
           P   +++++ +LT LL       R  C W   LG+ G +
Sbjct: 145 PAAAVMLTVVILTGLLCK-----RAFCGWACPLGLAGEY 178