Pairwise Alignments

Query, 175 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 327 a.a., quinol dehydrogenase membrane component (RefSeq) from Shewanella sp. ANA-3

 Score = 59.3 bits (142), Expect = 6e-14
 Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 34/194 (17%)

Query: 3   IIFAGIFGRYYCGFICPINTIIHPIQVLKDKAGFSSKNIPNFLKSEKPR------LLLML 56
           + +A   GR +C ++CP+N +      L+ K      N+P    SE PR      L L L
Sbjct: 106 LFYALAGGRVFCSWVCPVNLVTDTASWLRRKL-----NLPR--SSELPRNLRYYLLALAL 158

Query: 57  LFILGLGITVNAMINGSRFPLPII-------------IISIGVLTTLLFNENSWHRYLCP 103
           L  L  G  +   IN    P+P++             I++   L  L   E +W  +LCP
Sbjct: 159 LLPLLTGNLIWEWIN----PVPLVYRAVLFGSLSGLWILAAIFLLDLFIAERAWCGHLCP 214

Query: 104 WGFLLGITGHFS--KYGLNVNEKCISCKICENVCPAEAV--KVENKQNAEIFKKHCLLCL 159
            G L G+ G +S  K   +    C +C  C  VCP   V       QN  I    C  C 
Sbjct: 215 TGALFGLIGKWSPIKIVASKASACDNCMDCFAVCPERQVLKPALKGQNPVITSPDCTQCG 274

Query: 160 KCELKCPTNAITYK 173
           +C   C      Y+
Sbjct: 275 RCIDVCAQRVFRYQ 288