Pairwise Alignments

Query, 135 a.a., CopG family ribbon-helix-helix protein from Methanococcus maripaludis S2

Subject, 141 a.a., nickel-responsive transcriptional regulator NikR from Methanococcus maripaludis JJ

 Score = 74.3 bits (181), Expect = 6e-19
 Identities = 41/129 (31%), Positives = 80/129 (62%), Gaps = 8/129 (6%)

Query: 1   MANVERISLSFPKFLLSELDSIVESKNYSSRSELIRDAVRKYVIENNALN--PGKTVNGM 58
           M +++RIS+S P  LL+E D I+E + Y+SRSE IRD++R Y+I++  ++   G+   G 
Sbjct: 1   MVDMDRISISLPTNLLAEFDEIIEERGYASRSEAIRDSIRDYLIKHKWIHSLEGERA-GT 59

Query: 59  ITVVYS-PSKDAMEEMSHIYFDYENIIKSMNQSYVKTACEKNKKLEIFVIEGESDIVSEF 117
           I+++Y   S D ME++++I  DYE +I +    ++    + +  +E+ +++G++  + E 
Sbjct: 60  ISIIYDHHSTDVMEKLTNIQHDYEKLIVATIHMHL----DHDHCMEVVLVKGDAGEIKEL 115

Query: 118 YQKIQNISG 126
             K+ +  G
Sbjct: 116 TDKLTSQKG 124