Pairwise Alignments

Query, 432 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

Subject, 432 a.a., phenylacetate-coenzyme A ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  404 bits (1039), Expect = e-117
 Identities = 195/424 (45%), Positives = 289/424 (68%), Gaps = 1/424 (0%)

Query: 8   ECMDREEMRELQSKRLSDTVSRVYHNVPFYRKKMQSMGVYPEDIESIDDISKLPFTTKQD 67
           E  +R+E+R+ Q  RL +TV +   +  FY   ++  G+ P+ I S+DD+ ++PFTTK D
Sbjct: 8   ETWNRDEIRQAQLVRLRNTVEQAMRS-SFYGATLRKAGITPDSIRSLDDLRRIPFTTKDD 66

Query: 68  LRDNYPFGIFSVPMGEIVRVHASSGTTGKPTVVGYTRRDIAMWSEIVARALSCAGASRDD 127
           LR+ YP G+  VP  E+VR+HASSGTTG PTVV +T+ D+  W++++AR L   G  RDD
Sbjct: 67  LRNQYPDGLNCVPRTEMVRMHASSGTTGSPTVVYHTQSDLNAWADLMARCLHMVGVRRDD 126

Query: 128 FIQIAYGYGLFTGGLGLHYGGEKLGATVIPISGGNTQKQIQLMADFKTTVLACTPSYALY 187
             Q   GYGLFTGGLGLHYG E+LG   IP   GNT++Q++LM DF+T+V+   PSYALY
Sbjct: 127 VFQNMTGYGLFTGGLGLHYGAERLGCLTIPAGPGNTKRQVKLMRDFRTSVVHIIPSYALY 186

Query: 188 LAETLEDSGMTADDINLRVGIFGAEPWTPSMRKEIENKLGIKAMDIYGLSEVMGPGVACD 247
           LA  +E+ G     +  R+ + GAEP T   R+ IE  LG+KA + YGLSE+ GPGVA +
Sbjct: 187 LAAAVEEGGEDPHALPPRIAVIGAEPHTEEARRRIEEMLGLKAFNSYGLSEMNGPGVAFE 246

Query: 248 CEYQEGLHINEDHFVPEIIDPVTLKPLPAGSEGELVFTTITKEGMPLLRYRTRDLTSLNY 307
           C  Q G+H+ ED ++ EIIDP T +P+P G  GELV TT+ + GMP+LRYRTRDLT    
Sbjct: 247 CTEQNGMHVWEDAYIAEIIDPATGEPVPDGEVGELVMTTLCRRGMPVLRYRTRDLTRFLP 306

Query: 308 EKCKCGRTLVRMNKCTGRSDDMLIIRGVNVFPSQIESVLLEMSETKPHYLLIVDRINNLD 367
            +C CGR   R+++  GR+DDMLII+GVN++P QIE VL+   E   +YL++++R   +D
Sbjct: 307 GECPCGRVHRRLDRMVGRADDMLIIKGVNIYPMQIEQVLMAFPEVGQNYLIVLEREEFID 366

Query: 368 VLEVWVEIEDQFFSDKISMFEQLSKKIKHKIESTLGISVKIKLVEPKTIERSEGKSKRVI 427
            ++V VE+ D+ F + + + + L K I  +++  + ++ +++LV+  ++ ++EGK++RV+
Sbjct: 367 QIKVKVELRDEAFVEDMRVLQGLQKAIARRLKDEILVTPRVELVQNNSLPKAEGKAQRVL 426

Query: 428 DKRK 431
           D R+
Sbjct: 427 DLRE 430