Pairwise Alignments

Query, 578 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 616 a.a., indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  405 bits (1042), Expect = e-117
 Identities = 237/599 (39%), Positives = 344/599 (57%), Gaps = 45/599 (7%)

Query: 2   KKLMLGNEAVARGAYEAGVLVATAYPGTPSTEITE---HISKYPEINSEWSVNEKVALEV 58
           + L+LGNEA+ RGA EAG+ V T YPGTPS+E+ +    I        E+SVNEKVALEV
Sbjct: 13  RHLLLGNEAIVRGALEAGINVVTCYPGTPSSEVPDTFRRIGGDGRYRLEYSVNEKVALEV 72

Query: 59  AIGSAIAGARTVVSMKHVGLNVAADPLMTVAYTGINAGLLIIVADDPSMHSSQNEQDTRY 118
             G+A+AGA T+V+MKHVG+NVAADPL+T+ YTG+  GL+++ ADDP  HSSQNEQD R 
Sbjct: 73  GAGAALAGALTLVTMKHVGVNVAADPLLTMTYTGLPGGLVLLSADDPGCHSSQNEQDNRT 132

Query: 119 YGIFSKIPVLEPSDSQECKDFVKLGLEISEKFDTPVILRLSTRVSHSQSLVELEE-KEKI 177
           Y  F+ +P  EP+ +QE KD  +  L +S +   PV+LR +TRV+H +  V      E  
Sbjct: 133 YARFAGMPCFEPATAQEAKDMAREALLLSRETQQPVLLRTTTRVNHLRGGVTYGALPEPA 192

Query: 178 ELKPYDYNPSKYVSAPANAKKRRIFIEERLKELSNFADSSDVNKIEYANKKIGIITSGVA 237
            + P++ NP ++V  PA A+ R     + L  ++  A +S  N + +   +IG+I SG++
Sbjct: 193 AVVPFERNPRRFVPVPAVARARHFAQADVLGRVAELASASPWNTV-HGEGRIGVIASGIS 251

Query: 238 YNYAKEAVSD------ASFLKFGMSYPLPEEKIKEFVQNCDKVYVFEELEPIFEQKIRS- 290
             Y  +A+ +         L+ G ++PLPE  + +F+  CDKV V EELEP+ E+ +R+ 
Sbjct: 252 RAYLADALHERGLEGRVKVLELGFTWPLPERLLVDFLSGCDKVLVLEELEPLLERDVRAL 311

Query: 291 -----MGLNVIGK-EIFPIVGELSSEIIRNAL---LNESKIVIEKIE------DLPQRPP 335
                +G++V GK  +  + GE S+ I+ +AL   L E+     +        +LP RPP
Sbjct: 312 VQRLGLGVDVTGKGGVLTVFGEYSTTIVGDALSAFLGETPAAPVQCSPDAASMELPMRPP 371

Query: 336 VLCPGCHHRGPFYVLKKL---KLHVAGDIGCYTLGGFEPLNAIDTTICMGASIGMAHGFE 392
            LC GC HR  +Y ++K+     + + DIGCYTLG   PL+  D   CMG+SI    GF 
Sbjct: 372 NLCAGCSHRAVYYAVRKVFGDDAYYSSDIGCYTLGLLPPLSMADFLFCMGSSISSGSGFA 431

Query: 393 MARGKEFAKKSVAVIGDSTFWHSGVTGLIDIVYNKGHSTVIILDNSITAMTGHQENPSTG 452
            A G+      VA IGDSTF+HSG+TGL + ++NK    V+ILDN  TAMTGHQ NP   
Sbjct: 432 AASGRPV----VAYIGDSTFFHSGITGLANALFNKHDVLVVILDNGTTAMTGHQPNPGVD 487

Query: 453 KTLSGERTNQIDFEALGRSIGINRICVVDAYDLKALEETIKEEVNAEEPSLIITKRPCVL 512
             + G+    +D EA+ R  G+ ++  V  Y+LKA    +++        +II + PCVL
Sbjct: 488 AAVLGDACLHLDIEAIVRGCGVEQVATVHPYNLKATMAALEDMKQRTGVRVIIAQEPCVL 547

Query: 513 I------KGAKFDFKDYKIDPKLCTGCKLCL-KAGCPAISFDGKVAKINDSLCVGCGLC 564
                  K A+      +  P++    + CL +  CPA   DG+   I+   C GC +C
Sbjct: 548 YARRTLKKAARQTAYVAEQGPEV----EACLAELACPAFRRDGQDIAIDSEQCSGCMVC 602