Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 2e-29
 Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 24/355 (6%)

Query: 11  SLLFIIGSFIAKLADRIGIPDIPLLLITGLLIGPV-LGLISPIYAQTIFSFVGTIGLIIL 69
           +LL  I   ++ ++ ++GIP + + L  G+L G   +G I+      +   V  + L I+
Sbjct: 14  ALLIGISVLLSPVSSKLGIPILLVFLAVGMLAGEDGIGQIA-FDNYPVAYLVSNLALAII 72

Query: 70  LLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFIYALPFTNPIGFIYGAVNC 129
           LL G    R    +      + L T+G+ ++ L++G++  +++ L      G + GA+  
Sbjct: 73  LLDGGMRTRVASFRVAFWPSVSLATLGVAVTTLLTGLLAMWLFNLSLLQ--GVLVGAIVG 130

Query: 130 ATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIVATTLTLSSLGLSKSVNPILDFVM 189
           +TD A +  +     ++ ++  TLE ES  NDP+ +  T   ++ LG S   N    F++
Sbjct: 131 STDAAAVFSLLKGRSLNERVGATLEIESGTNDPMAVFLTVTLIAVLG-SAETNLSAGFLL 189

Query: 190 LAF-----GGLALGYVGGKIFEFVVSKDEFGEYI-APLGVGSAMALWFFGEDVAPHFLGY 243
           L+F      G  LG  GG I  +++++++  E + + L V   + ++     +       
Sbjct: 190 LSFIQQFGVGALLGLAGGWILWWLINRNQLPEGLYSILAVSGGLMIFALSNAL------- 242

Query: 244 GLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGASISLPLL 303
           G SG +++ + GL +GN    +P  S+  H +      ++ L +I +F+ LG  ++   L
Sbjct: 243 GGSGILSIYLTGLLLGN----RPTRSR--HAILNVLDGMTWLAQIGMFLVLGLLVTPSEL 296

Query: 304 KSFGIYGLLCAIGTLFIARPIGVFIATAIPPVSSLKERIYFALEGPRGVVPAALA 358
               + GL  A+G +  ARPI V+I  A     + +E+ + +  G RG VP  LA
Sbjct: 297 MEIALPGLALAVGMILFARPIAVWIGLAPFKSFTAREKWFVSWVGLRGAVPIILA 351