Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 527 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 86/350 (24%), Positives = 149/350 (42%), Gaps = 30/350 (8%)

Query: 29  IPDIPLLLITGL---LIGPVLGLISPIYAQTIFSFVGTIGLIILLLVGAFEMRWIVLKRV 85
           IP   LL+I GL   L    L  +SP    +IF       L  LL   A+ ++W  LK+ 
Sbjct: 42  IPYTLLLVIAGLGLALFNVRLINLSPELILSIF-------LPPLLFEAAWNLKWNNLKKD 94

Query: 86  LKTVLKLDTIGLVISLLISGIIFSFIYALPFTNPIGFIYGAVNCATDPATLIPIFSKSDV 145
              +     IG+ IS+L  GI F           I  + GA    TDP ++I +F +  V
Sbjct: 95  WVPISLYAVIGVGISIL--GIAFGLSQTTSVPIVIALLIGASLATTDPVSVIAMFRELGV 152

Query: 146 DPKIAVTLEAESVFNDPLGIVATTLTLS---SLGLSKSVNPILDFVMLAFGGLALGYVGG 202
             +    +E ES+FND + +V  +L L+    +   ++ + + D +     G+  G + G
Sbjct: 153 AERTRTLVEGESLFNDGVAVVTLSLLLALPLEVQGFEAKSLLADLIRYLGIGIGSGCLIG 212

Query: 203 KIFEFVVSKDEFGEYIAPLGVGSAMALWFFGEDVAPHFLGYGLSGYMAVAIMGLYIGNVV 262
               F+  + +       L + +A   +   E +       G SG +AV  +GL +GN  
Sbjct: 213 FGVSFLTQRLDLPLLEQSLTLVAAYGSYLLSEQL-------GGSGVIAVVPVGLILGNFG 265

Query: 263 TKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGASISL-PLLKSFGIYGLLCAIGTLFIA 321
           ++   + +    + EF   L+     ++F+ +G  + L  L ++ G   +   +  +  A
Sbjct: 266 SRIGMSPRTRVIVTEFWEFLAFFVNSIVFLLIGDQVPLESLWQNRG--AIAITVVAMLAA 323

Query: 322 RPIGVF----IATAIPPVS-SLKERIYFALEGPRGVVPAALAAMIYTNIM 366
           R I  F    ++  +     S +E +     G RG V  ALA  I T ++
Sbjct: 324 RAIATFGLGWLSNRLSHSDLSWRELVVVWWGGIRGAVSIALALSIPTVLL 373