Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 610 a.a., sodium/hydrogen exchanger (NCBI) from Rhodospirillum rubrum S1H

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 94/370 (25%), Positives = 169/370 (45%), Gaps = 29/370 (7%)

Query: 1   MEISLVIGYISLLFIIGSFIAKLADRIGIPDIPLLLITGLLIGPV-LGLISPIYAQTIFS 59
           M ++++IG  + L  I    + ++ R+G P + + L  GLL G   +G I    + T + 
Sbjct: 6   MFLAILIG--AGLIGISVVTSLISFRVGAPLLLVFLGVGLLAGQDGIGGIVFNDSGTAY- 62

Query: 60  FVGTIGLIILLLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFIYALPFTNP 119
           F+G++ L ++L    F  R    +      + L T+G+ ++  +  I    +  L +   
Sbjct: 63  FIGSLALAVILFDSGFSTRLQTFRLAAAPSIVLATLGVALTTALVAIPSHSLLGLSWEES 122

Query: 120 IGFIYGAVNCATDPATLIPIFSKSDV--DPKIAVTLEAESVFNDPLGIVATTLTLSSL-- 175
              + GAV  +TD A +  +     +    ++  TLE ES  NDP+ I  T +TL  L  
Sbjct: 123 A--LMGAVVGSTDAAAVFFLLRVGGILIRDRVRATLEVESSTNDPMAIFLT-ITLVELAS 179

Query: 176 -----GLSKSVNPILDFVMLAFGGLALGYVGGKIFEFVVSKDEFGEYIAPLGVGSAMALW 230
                G + S    L FV     GL  G++GG +    +++      + P+ +G A+AL+
Sbjct: 180 AGGFSGEALSWGLGLAFVRQMGLGLLCGWIGGHLLVVGINRLRLEPALYPI-LGLALALF 238

Query: 231 FFGEDVAPHFLGYGLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILI 290
            F    A   +  G SG++A+ + G+ +GN   +K +    + +  E  T L+ +T   +
Sbjct: 239 LF----AAVSMVDG-SGFLAIYVAGMVMGN---RKMRGGPALRRFQEALTWLAQMT---M 287

Query: 291 FVFLGASISLPLLKSFGIYGLLCAIGTLFIARPIGVFIATAIPPVSSLKERIYFALEGPR 350
           F+ LG   S        +  +L  +  +F+ARP+ V++   +P      E  + A  G R
Sbjct: 288 FLTLGLFASPSTFIDVALPSVLIGLFLVFVARPVAVWLC-LLPFGYDRNETAFVAWVGLR 346

Query: 351 GVVPAALAAM 360
           G V   LA +
Sbjct: 347 GAVSILLAIL 356