Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 643 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (275), Expect = 1e-28
 Identities = 87/364 (23%), Positives = 176/364 (48%), Gaps = 24/364 (6%)

Query: 2   EISLVIGYISLLFIIGSFIAKLADRIGIPDIPLLLITGLLIGPVLGLISP--IYAQTIFS 59
           +I+ ++G + +L I+  +   L  R+ +P I  LL+ GLL+GPV  L+ P  I+   +F 
Sbjct: 4   KITAMLGLVGILSIVCQW---LGWRLRLPAILPLLLCGLLVGPVFNLLDPDAIFGDLLFP 60

Query: 60  FVGTIGLIILLLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFIYALPFTNP 119
            + ++G+ ++L  GA  + +  ++   + V  L ++G +++ +  G+   FI  + F+  
Sbjct: 61  VI-SLGVAVILFEGALTLNFSEIREHGRMVTHLVSLGTLVTWICIGVATHFI--MGFSWE 117

Query: 120 IGFIYGAVNCATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIVATTLTLSSLGLSK 179
           +  ++GA+   T P  ++P+        ++A  L  E +  DP+G +   L    L ++ 
Sbjct: 118 LAMLFGALVVVTGPTVIVPMLRSIKPKSQLASILRWEGIVIDPIGALLAVLVFEYLTVA- 176

Query: 180 SVNPILDFVMLAFGGLALGYVGGKIFEFVVSKDEFGEYIAPLGVGSAMALWFFGEDVAPH 239
              P    ++  F  L +G   G +F + +       ++      +A+     G  VA +
Sbjct: 177 -AEPASHVLLSLFSMLGVGLGLGVLFGYGIGVMLRRAWVPHYLKNTAVLTIMLGAFVASN 235

Query: 240 FLGYGLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGASIS 299
            L    SG + V +MG+++ N+         D+ ++ EF   L+ L    +F+ L A + 
Sbjct: 236 LLQEE-SGLLTVTVMGIWLANM------RGVDIGEIIEFKETLTVLFISGLFILLAARLD 288

Query: 300 LPLLKSFGIYGLLCAIGTLFIARPIGVF---IATAIPPVSSLKERIYFALEGPRGVVPAA 356
              L   G  GL   +  +FIARP+ V+   + T++P      ++ + +   PRG+V AA
Sbjct: 289 STALMQLGWQGLALLLVVMFIARPLSVWCCAVGTSLPRA----DKWFLSWVAPRGIVAAA 344

Query: 357 LAAM 360
           ++++
Sbjct: 345 VSSL 348