Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 669 a.a., sodium/hydrogen exchanger family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (281), Expect = 3e-29
 Identities = 92/383 (24%), Positives = 179/383 (46%), Gaps = 30/383 (7%)

Query: 3   ISLVIGYISLLFIIGSFIAKLADRIGIPDIPLLLITGLLIGPVLGLISP--IYAQTIFSF 60
           +  + G ++L+ ++  F   L  ++ +P I  LL+ GLL+GPV G+++P  I+   +F  
Sbjct: 2   VEKITGMLALIGVLSLFCQWLGWKLRLPAILPLLVCGLLLGPVFGILNPDAIFGDLLFPI 61

Query: 61  VGTIGLIILLLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFIYALPFTNPI 120
           + ++G+ ++L  GA  + +  +K   + V  L +IG++I+     I  +  Y L F+  +
Sbjct: 62  I-SLGVAVILFEGALTLNFKEIKDHGRMVTHLVSIGMLITW--GCISTATYYLLDFSWEV 118

Query: 121 GFIYGAVNCATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIVATTLTLSSLGLSKS 180
             ++GA+   T P  ++P+        ++A  L  E +  DP+G +   L    + +S +
Sbjct: 119 ALLFGALVVVTGPTVIVPMLRSIRPKSQLASILRWEGIVIDPIGALLAVLVFEYITVSGN 178

Query: 181 VNPILDFVMLAFG-----GLALGYVGGKIFEFVVSKDEFGEYIAPLGVGSAMALWFFGED 235
                  V+ A G     GL LG   G +   V+  +    Y+    V + M   F G +
Sbjct: 179 QT---SHVLYALGSMLTMGLGLGAAAGYLVGQVIRHNLLPHYLRNTAVLTLMLGIFVGSN 235

Query: 236 VAPHFLGYGLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLG 295
           +         SG + V +MG+++ N+         D+ ++ EF   L+ L    +F+ L 
Sbjct: 236 LLQE-----ESGLLTVTVMGIWLANM------RGVDIAEILEFKETLTVLLISALFILLA 284

Query: 296 ASISLPLLKSFGIYGLLCAIGTLFIARPIGVFIATAIPPVSSLKERIYFALEGPRGVVPA 355
           A +    +   G  G+     T+ IARP+ ++ A+ I    S  ++ +     PRG+V A
Sbjct: 285 ARLDSNAMMDLGWGGVGVLAVTMLIARPLSIW-ASGIGTSLSKADKWFLCWIAPRGIVAA 343

Query: 356 ALAAMI-----YTNIMHNPGIIP 373
           A++++       +N+     I+P
Sbjct: 344 AVSSLFAIKLEASNVQGADAIVP 366