Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 434 a.a., sodium/hydrogen exchanger family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.8 bits (216), Expect = 6e-22
 Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 49/416 (11%)

Query: 15  IIGSFIAKLADRIGIPDIPL----LLITG--LLIGPVLGLISPIYAQTIFSFVGTIGLI- 67
           +  S + KL + + I  + L    LL+ G   L G V G       +  F  +   G++ 
Sbjct: 19  VASSRLHKLQETVAITALALGTSLLLLLGGKALGGNVYGYFVAGLEKLDFQALLLNGMLG 78

Query: 68  ILLLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFI---YALPFTNPIGFIY 124
            LL  GA ++R  +L+     +L L  +G ++S  I G +  ++   + LP       ++
Sbjct: 79  FLLFAGALQIRLKILRHQKWEILILAFVGTLLSTFIVGGLLYYLAPMFGLPLALSHCLLF 138

Query: 125 GAVNCATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIVATTLTLSSLGLSKSVNPI 184
           GA+   TDP  ++ I  K      IA+ +E ES+FND +G+V   + ++   L+ S  P+
Sbjct: 139 GALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLV---IFVAISHLAFSTEPL 195

Query: 185 ------LDFVMLAFGGLALGYVGGKIFE--FVVSKDEFGEYIAPLGVGSAMALWFFGEDV 236
                 L FV  A GG+  G V G +    F   ++E    +  L + +A      G  +
Sbjct: 196 TFTQISLLFVQEALGGVLYGAVLGLLLHHFFRYCEEETQLMLVTLLIPTA------GYVM 249

Query: 237 APHFLGYGLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGA 296
           A      G+SG +A+   G+ IGN    K    ++  K+  F + + S    L+F+ LG 
Sbjct: 250 AAEL---GVSGPLAMVSAGIIIGNYSVPKFFARQERVKLYTFWSLIESFFNALLFLLLGL 306

Query: 297 SISLPLLKSFGIYGLLCAIGTLFIARPIGVFIA----TAIPPVSSLKERIYFALEGPRGV 352
            + L   K+   + +L AI  +  AR + VF+       +   +   E I     G RG 
Sbjct: 307 LLLLVTFKAPLWWFMLLAIPLVLTARAVSVFLPYMGFRLVKSYNPYAESI-LIWGGLRGG 365

Query: 353 VPAALAAMIYTNIM--HNPGIIPHSITQYMPPEMIAGSILVATFATIFLSVIVEAS 406
           +  A+A  +   I+    PG+  H +            +LV T+A +  S++++ S
Sbjct: 366 LALAMAMSLPKGIIIDSQPGVELHEL------------VLVMTYAVVVFSILIQGS 409