Pairwise Alignments

Query, 417 a.a., sodium:proton antiporter from Methanococcus maripaludis S2

Subject, 389 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 26/330 (7%)

Query: 15  IIGSFIAKLADRIGIPDIPL----LLITG--LLIGPVLGLISPIYAQTIFSFVGTIGLI- 67
           +  S + KL + + I  + L    LL+ G   L G V G       +  F  +   G++ 
Sbjct: 19  VASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFVAGLEKLDFQALLLNGMLG 78

Query: 68  ILLLVGAFEMRWIVLKRVLKTVLKLDTIGLVISLLISGIIFSFI---YALPFTNPIGFIY 124
            LL  GA ++R  +L+     +L L  +  ++S  I G +  +I     LP       ++
Sbjct: 79  FLLFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLYYIAPMLGLPLALSHCLLF 138

Query: 125 GAVNCATDPATLIPIFSKSDVDPKIAVTLEAESVFNDPLGIV----ATTLTLSSLGLSKS 180
           GA+   TDP  ++ I  K      IA+ +E ES+FND +G+V     + L  S+  L+ S
Sbjct: 139 GALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLVIFVAISHLAFSTEPLTFS 198

Query: 181 VNPILDFVMLAFGGLALGYVGGKIFE--FVVSKDEFGEYIAPLGVGSAMALWFFGEDVAP 238
              +L FV  A GG+  G V G +    F   ++E    +  L + +A      G  +A 
Sbjct: 199 QISLL-FVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTLLIPTA------GYVIAE 251

Query: 239 HFLGYGLSGYMAVAIMGLYIGNVVTKKPKNSKDMHKMAEFCTDLSSLTRILIFVFLGASI 298
                G+SG +A+   G+ IGN    K     +  K+  F + + S    L+F+ LG  +
Sbjct: 252 VL---GVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALLFLLLGLLL 308

Query: 299 SLPLLKSFGIYGLLCAIGTLFIARPIGVFI 328
            L   K+   + +L AI  +  AR + VF+
Sbjct: 309 LLVTFKAPLWWFMLVAIPLVLTARAVSVFL 338