Pairwise Alignments

Query, 340 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 306 a.a., tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD from Synechocystis sp000284455 PCC 6803

 Score = 70.1 bits (170), Expect = 7e-17
 Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 23/226 (10%)

Query: 40  TEDNTFTVRSDDPEELMHSRVGALKEGIEKFAVPSNVTEIKNPK----ILDLCSGMGYNA 95
           T D +FT  S    E  HS+ GA  E  EKF  P  + ++   K    I+D+C G+GYN 
Sbjct: 12  TADGSFTFYSPQFGETFHSQRGAKAEADEKFVHPCLLPQLAAKKSRLTIIDVCYGLGYNT 71

Query: 96  VSALH--YNINSEIDMVEYS--------KEMLFLSLALDIPMNEHLIIKNAIFEFFKGNG 145
            +AL   + IN    +  YS        ++ +   L    P     I+++          
Sbjct: 72  AAALTAIWQINPHCHVTLYSLENDLQVPRQAIANGLLQGWPDLVQEILQDLAQREMVARE 131

Query: 146 NQKIRIFNEDARFTLLR---KDLKKYDCVFHDAFSPLNDPVLYTVEFLKLIYENMADSGV 202
                +   DAR TLL    +D+K  D +F D FSP   P L+TVEFL  + + +A +G 
Sbjct: 132 FLTAHLAIGDARQTLLSVVPRDIK-VDAIFLDPFSPPKCPQLWTVEFLCHLGDRLAPTGR 190

Query: 203 LISYSSSIPFRSALVECGFIIS-----EGPSVGRKRGATLAYKNPN 243
           L +Y S+   R  L   G  I+     + P   R+   TLA   P+
Sbjct: 191 LATYCSAAAVRHGLQLAGLSIATMGDGQPPHPRRRPLGTLASHQPS 236