Pairwise Alignments

Query, 340 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 257 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 50.1 bits (118), Expect = 6e-11
 Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 22/222 (9%)

Query: 40  TEDNTFTVRSDDPEELMHSRVGALKEGIEKFAVPSNVTEI----KNPKILDLCSGMGYNA 95
           T+D + T+ S   ++  H+  GA+ E  E   + S + ++    +   IL+L  G G NA
Sbjct: 30  TKDGSHTLMSSLFDDSYHAHNGAISES-EHVYIQSGLADLDPSFERVNILELGFGSGMNA 88

Query: 96  VSALHYNINSEIDMVEYSKEMLFLSL-ALDIPMN--------EHL--IIKNAIFEFFKGN 144
           +  L   + S+    +  + + F+++ A  +P          EHL   ++          
Sbjct: 89  MLTLKRVLGSDGKPGKLKRPIRFVTVEAYPVPSEVIAQLNYKEHLPPALQELFDRLHSAP 148

Query: 145 GNQKIRIF------NEDARFTLLRKDLKKYDCVFHDAFSPLNDPVLYTVEFLKLIYENMA 198
             + + +F         A +  L       + VF+D F+P   P L+T +    ++  M 
Sbjct: 149 WGEDVTLFPGFVLHKIHATWDSLALPENSINLVFYDGFAPSKQPELWTQDNFDRLFPMMM 208

Query: 199 DSGVLISYSSSIPFRSALVECGFIISEGPSVGRKRGATLAYK 240
             G+L+SY ++  F+  L   GF +   P    +R  T A+K
Sbjct: 209 PGGMLVSYCANGQFKRNLKAAGFKVKPHPGALGRREMTRAWK 250