Pairwise Alignments

Query, 292 a.a., RimK family alpha-L-glutamate ligase from Methanococcus maripaludis S2

Subject, 299 a.a., ribosomal protein S6 modification protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 14/232 (6%)

Query: 59  AFVRNIGEGVEMFHRFDMLKYLENYVPIINPMDGIENAGNKFRTSFLMEVHKIPHPKTIV 118
           A +  IG  +  +    + ++    V  +N   GI  + +K R+  LM    I  P T  
Sbjct: 60  AVIPRIGASITFYGSAVLRQFEMMGVYALNDSVGISRSRDKLRSMQLMSRRGIGLPITGF 119

Query: 119 AEDVNKALIAADKFEDV-----VLKPLFGNQGKGLVRVKGRSTVAKLKALNTFKSTHGVI 173
           A   NK     D  + V     V+K L G QG G+V  + R     +  +  F      I
Sbjct: 120 A---NKPSDIPDLIDMVGGAPLVIKLLEGTQGIGVVLAETRKAAESV--IEAFMGLKANI 174

Query: 174 YMQEFVNNPNNVYRDIRAFVVGDKVISAMYRTS--DNWITNIHQNGVPEKCEITEELSKI 231
            +QE++   N    DIR FV+GDKV++AM R +    + +N+H+ G     ++T E   +
Sbjct: 175 MVQEYIKEANGA--DIRCFVLGDKVVAAMKRQAMPGEFRSNLHRGGTASLVKLTPEERSV 232

Query: 232 VLAAKDAVGLVYAGVDILESSDGLKVIEVNACPSWEGLSRISEVDIAQNLID 283
            + A   +GL  AGVD+L S+ G  V+EVN+ P  EG+   +  D+A  +I+
Sbjct: 233 AIRAAKTMGLNVAGVDLLRSNHGPLVMEVNSSPGLEGIEGATAKDVAGAIIE 284