Pairwise Alignments

Query, 292 a.a., RimK family alpha-L-glutamate ligase from Methanococcus maripaludis S2

Subject, 301 a.a., ribosomal protein S6 modification protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.8 bits (229), Expect = 8e-24
 Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 15/291 (5%)

Query: 1   MRMGIISEERD-WVTDELKSKMEKNDIDPVIIQPSKI---ISYIESEVKFEQNNRSILDL 56
           M++GI+S+  + + T  L +  E    + V+I        I+ I+  + ++    +  D 
Sbjct: 1   MKIGILSQFPELYSTRRLVAACESRGHEAVVINTLNCYMNINSIKPSIHYQGQELTGFD- 59

Query: 57  KCAFVRNIGEGVEMFHRFDMLKYLENYVPIINPMDGIENAGNKFRTSFLMEVHKIPHPKT 116
             A +  I   V  +    + ++    V   N    I  + +K R   L+    I  P T
Sbjct: 60  --AIIPRIHASVTFYGCAVVRQFEMMGVFAANDSISIARSRDKLRALQLLSRKGIGMPIT 117

Query: 117 IVAEDVNKA--LIAADKFEDVVLKPLFGNQGKGLVRVKGRSTVAKLKALNTFKSTHGVIY 174
             A   N    LI       +V+K L G QG G+V  + ++    +  +  F      I 
Sbjct: 118 GFANKPNDIPDLINMVGGAPLVIKLLEGTQGIGVVLAETKTAAESV--IEAFLGLKANIM 175

Query: 175 MQEFVNNPNNVYRDIRAFVVGDKVISAMYRTSD--NWITNIHQNGVPEKCEITEELSKIV 232
           +QE++   N    DIR FVVGDKV+++M R     ++ +N+H  G  EK +IT +  K+ 
Sbjct: 176 LQEYIKESNG--SDIRCFVVGDKVVASMKRQGPEGDFRSNLHLGGCGEKVKITPKERKMA 233

Query: 233 LAAKDAVGLVYAGVDILESSDGLKVIEVNACPSWEGLSRISEVDIAQNLID 283
           +AA  A+GLV AGVDIL S+ G  ++EVN+ P  EG+ + + + + + +++
Sbjct: 234 VAAVKAMGLVVAGVDILRSNRGPLILEVNSAPGIEGIEQTTGISVTEPIVE 284