Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 463 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  144 bits (362), Expect = 8e-39
 Identities = 117/434 (26%), Positives = 203/434 (46%), Gaps = 18/434 (4%)

Query: 10  TEDVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGV 69
           T  + +L V  ++P  + M +  + N+VDG F+G ++G+ A   ++L FP  M++ A   
Sbjct: 15  TVPIGRLFVSNALPMAVVMSMGGVLNVVDGIFVGHFIGSDALAAVSLAFPVAMVLSALTT 74

Query: 70  TFGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSV-LITIVGVVFMVPILNLLGTSA 128
             G G SSL++R LG G+   A +        VL +SV L+ +  VV    + ++   + 
Sbjct: 75  LTGGGMSSLMARYLGAGDRGAAGRIFAETHGLVLAISVGLVVLWAVVGAALVDSMAAGNP 134

Query: 129 DIFPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIV 188
            +   A+DY +I++ G      L    + +R EG A +     V+  + NI  + + I+V
Sbjct: 135 KVAGLAQDYLQIMILGAPAQLMLGVHADALRNEGRAGLIAALSVLVNLFNIGANGLGIVV 194

Query: 189 FNMGIKGAAIATVLSQIIG---VIYILKHQFG-KNTSIKYAMN-----DFLINLKILKET 239
             +GI G+A+ TV +Q +G   VI +  H  G    S+  A N       +I L +    
Sbjct: 195 LGLGISGSALGTVAAQALGLALVIGVRGHSKGLLPLSVLRARNWLGAWSQIIRLGLPLCL 254

Query: 240 VFIGASEFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQP 299
            FIG +  A ++I S+ L  G +       +  +A YGV+ R+     +P + I    Q 
Sbjct: 255 SFIGIAMVASVVIVSLRLSAGTDY------NALVAAYGVVTRLLGFAFLPQMAIALATQS 308

Query: 300 IVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFI-QIFITDPEVISQGVF 358
           I G N G G+ +R   +++LAL G + L  L  +L  +F    +   F  DP VI     
Sbjct: 309 ITGNNAGAGRTDRARAALRLAL-GAAFLWCLPVVLAGVFAGTTLGSWFSDDPAVIDAVAE 367

Query: 359 ATRIFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIW 418
             R   +F    G  + +     +LG+      ++  +  L     ++ L + FG++ +W
Sbjct: 368 ILRPMMLFYAASGPVLVLALYVHALGQPGRTAALTLVKPWLLTPLLILALSIGFGVSEMW 427

Query: 419 FSFPIGDLLGFTLA 432
            +FP+ D +   LA
Sbjct: 428 LAFPMADAIILMLA 441