Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 495 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  112 bits (281), Expect = 2e-29
 Identities = 97/426 (22%), Positives = 197/426 (46%), Gaps = 25/426 (5%)

Query: 13  VKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRW--VGTAAFTGIALIFPFQMMIMAFGVT 70
           + + ++ +S  A IG+  + + +++D FF+        AA  G A    F    +  G++
Sbjct: 11  IMRHILVMSSTAAIGISALFVVDLIDIFFLSLLGEQELAAAVGYAGTISFFTTSIGIGLS 70

Query: 71  FGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADI 130
             +G  +L+SR +G    + A++   N+    ++++ ++ I+   F+  +L L+G +   
Sbjct: 71  IALG--ALVSRAVGAKEFELAKRLLLNSAVVTVLVASVVAIIVTCFIPELLTLVGATGRT 128

Query: 131 FPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVFN 190
              A  Y  I++         +A    +RA G AK++M + +    +N++ DPI I +  
Sbjct: 129 GELAAGYLYILVPSMPIICLAMALGAALRAVGDAKLSMVSTLTGGGVNLVFDPIFIFLLA 188

Query: 191 MGIKGAAIATVLSQIIGVI-----YILKHQ-FGKNTSIKYAMNDFLINLKILKETVFIGA 244
           MGI+GAA+A+VL+++  ++      ++KH+ FG+             +L   KE +    
Sbjct: 189 MGIEGAALASVLARLAVLLVAARGVVVKHKLFGR------------FDLTAFKEDIKPIF 236

Query: 245 SEFAKLIISSILLILGNNLLG---IYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIV 301
           +     ++++I   +GN ++       GD  +A + V+ R+  +    +  +     PIV
Sbjct: 237 AIAGPAMMTNIATPIGNAVVTRAIAEFGDSYVAAWAVLGRLTPVAFGMIFALSGAIGPIV 296

Query: 302 GYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEVISQGVFATR 361
           G N+G  +  RV +S+  AL   +   +   +L+M+  E+ + +F    E      F  R
Sbjct: 297 GQNFGAREFARVRQSLTKALQFCALYVVTVSLLLMLLQEQIVALFAMQGESAELIRFFCR 356

Query: 362 IFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIWFSF 421
              +F    GA       + +LGKAK + + +  + TL  +P +       G+ G+    
Sbjct: 357 YIAVFFVFSGALFVANASFNNLGKAKYSTLFNVGKATLGTIPFVYYGGQLGGVEGVLIGQ 416

Query: 422 PIGDLL 427
            +G +L
Sbjct: 417 VLGAIL 422