Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (334), Expect = 1e-35
 Identities = 105/428 (24%), Positives = 199/428 (46%), Gaps = 26/428 (6%)

Query: 10  TEDVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGV 69
           ++ + ++L+ +S+P +IG+L +  +++VD FFI + +GT A   I+  FP  +++ +  +
Sbjct: 9   SQPIGRVLLNMSLPNLIGILTILGFSLVDTFFISQ-LGTEALAAISFTFPVTLIVSSIAI 67

Query: 70  TFGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSAD 129
             G G S+ L R +G GN   A+    +A+     L   ++++G +F+ P+  LLG + D
Sbjct: 68  GIGAGVSTNLGRLIGSGNSPKAKVFLHDALLITFWLIAALSLLGSLFIGPLFTLLGANDD 127

Query: 130 IFPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVF 189
             P  +DY  +   G      L+  N  +RA G  K     M + A+IN++LDP+LI  F
Sbjct: 128 SLPLIRDYMFLWYLGAPLLVLLMVGNQGLRATGDTKSPAKIMALAAVINLVLDPLLI--F 185

Query: 190 NMG------IKGAAIATVLSQIIGVI---YILKHQFGKNTSIKYAMNDFLINLKILKETV 240
            +G      I+GAAIAT++S ++ +    Y+L  +       ++ +     N + L    
Sbjct: 186 GLGPFPRLEIQGAAIATLISWVVALSLSGYLLIIKRNLVDFAEFNLERIHCNWRQLAHIA 245

Query: 241 FIGA-----SEFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQ 295
              A     +  A  II ++L  + ++         A+A +G   R+  +LL+ V+ +  
Sbjct: 246 QPAALMNLLNPVANAIIMAMLARIDHS---------AVAAFGAGTRLESVLLIAVMALSS 296

Query: 296 GFQPIVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEVISQ 355
              P +  N G GQ  R  +++ L+L        L ++ + +      Q+F  DP+VI  
Sbjct: 297 SLVPFIAQNLGAGQTERARDALMLSLRFVLVFQTLIYLPLALMATPIAQLFSKDPQVIEW 356

Query: 356 GVFATRIFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLN 415
             F           +G  +       +  +   + +++  R  L L+P   +     G+ 
Sbjct: 357 LSFYIIALPAAYGPLGMVILTATSLNAYHRPMSSLVLNVCRLFLLLLPLAALGSYLGGVK 416

Query: 416 GIWFSFPI 423
           G+  + PI
Sbjct: 417 GLLLALPI 424