Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 501 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (318), Expect = 1e-33
 Identities = 108/435 (24%), Positives = 212/435 (48%), Gaps = 26/435 (5%)

Query: 4   KSEFLGTEDVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGT---AAFTGIALIFPF 60
           +++F+    ++ +LV +S  A +G+  + + +++D FF+   +G    AA  G A    F
Sbjct: 3   QAKFVEGSILRHILV-MSSTAAVGISALFVVDLLDIFFLSL-LGEHELAAAVGYAGSISF 60

Query: 61  QMMIMAFGVTFGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPI 120
              ++  G++  +G  +L+SR +G  +++ A++   N+     ++SV ++IV   F+  +
Sbjct: 61  FTTLIGIGLSIALG--ALVSRSIGAKDVELAKRLLLNSAVVTTLISVFVSIVVTTFIPEL 118

Query: 121 LNLLGTSADIFPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINII 180
           + L+G S      A+ Y  I++    F    +A    +R+ G AK++M + +    +N +
Sbjct: 119 VTLVGASGHTAELAESYLYILVPSLPFICLAMALGGALRSVGDAKLSMMSTLAGGGVNAV 178

Query: 181 LDPILIIVFNMGIKGAAIATVLSQ-----IIGVIYILKHQFGKNTSIKYAMNDFLINLKI 235
           LDPI I +F MGI+GAA+A+VL++     I G   ++KHQ       K+  +DF  +LK 
Sbjct: 179 LDPIFIFLFAMGIEGAALASVLARITVFVIAGRGVMVKHQL----LGKFNRSDFKADLK- 233

Query: 236 LKETVFIGASEFAKLIISSILLILGNNLLG---IYGGDIAIAIYGVIMRIAMLLLMPVLG 292
               +F  A      I+++I   +GN  +       GD  +A + V+ R+  +    +  
Sbjct: 234 ---PIFAIA---GPAILTNIATPIGNAFVTRAIADFGDAYVAGWAVLGRLVPVTFGMIFA 287

Query: 293 IVQGFQPIVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEV 352
           +     PIVG N+G G+ +RV ES+  A+   +   ++  +L+ +   + + +F    + 
Sbjct: 288 LSGAIGPIVGQNFGAGRFDRVRESLTKAIQFCTLYVVVMSLLLFLLKSQIVSLFDMKGDS 347

Query: 353 ISQGVFATRIFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFF 412
            +   F      +F    G        + +LGKAK + + +  + TL  +P + +     
Sbjct: 348 AALIEFFCSYIAVFFIFSGILFVANASFNNLGKAKYSTLFNVGKATLGTVPFVYVGAQLG 407

Query: 413 GLNGIWFSFPIGDLL 427
           G+ G+     IG +L
Sbjct: 408 GVYGVLIGQVIGSIL 422