Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (353), Expect = 8e-38
 Identities = 108/431 (25%), Positives = 201/431 (46%), Gaps = 30/431 (6%)

Query: 13  VKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGVTFG 72
           + ++L+ +S+P +IG++ +  +++ D FFI + +GT A   I+  FP  ++I +  +  G
Sbjct: 12  IGRVLLNMSLPNLIGIMTILGFSLADTFFISQ-LGTEALAAISFTFPVTLIISSIAIGVG 70

Query: 73  IGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADIFP 132
            G S+ L R +G GN   A+    +A+    IL   ++ +G +F+ P+ +LLG +    P
Sbjct: 71  AGVSTNLGRLIGSGNAPQAKVFLHDALLLTFILIASLSALGSIFIEPLFSLLGANETSLP 130

Query: 133 YAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVFNMG 192
              DY      G      L+  N  +R+ G  +     M + AIIN+ILDP+LI  F +G
Sbjct: 131 LIHDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMTLAAIINLILDPLLI--FGIG 188

Query: 193 ------IKGAAIATVLSQII-----GVIYILKHQFGKNTSIKYAMNDFLINLKILKETVF 241
                 I+GAAIAT+ S ++     G + I+KH+  +  +  + ++    N   L     
Sbjct: 189 PFPRLEIQGAAIATLFSWLVALSLSGYLLIIKHRMLERAA--FDIDRMRANWSKLAHIAQ 246

Query: 242 IGA-----SEFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQG 296
             A     +  A  +I ++L  + ++         A+A +G   R+  +LL+ V+ +   
Sbjct: 247 PAALMNLINPLANAVIMAMLAHIDHS---------AVAAFGAGTRLESVLLIVVMALSSS 297

Query: 297 FQPIVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEVISQG 356
             P +  N G GQ  R  +++ L+L        L +I +  F +    +F TDP+V+   
Sbjct: 298 LMPFIAQNLGAGQPQRAKQALLLSLKFILVFQTLLYIPLAFFAQPLASLFSTDPQVLEWL 357

Query: 357 VFATRIFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNG 416
            F   +       +G  +       +  +   + +I+  R  L ++P   +     G+ G
Sbjct: 358 SFYILVLPCAYGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLMLPLAALGSYIDGVKG 417

Query: 417 IWFSFPIGDLL 427
           +  + PI +LL
Sbjct: 418 LLLALPITNLL 428