Pairwise Alignments

Query, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 451 a.a., putative transmembrane cation efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  196 bits (497), Expect = 2e-54
 Identities = 134/445 (30%), Positives = 217/445 (48%), Gaps = 20/445 (4%)

Query: 9   GTEDVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFG 68
           G+ D+  L  KL VP ++GM+  A++ I DG F+G+ +G+ A   + +  P  M+    G
Sbjct: 8   GSMDISTLFRKLLVPTVLGMVFSAIFVITDGIFVGKGIGSDALAAVNITAPLFMIATGIG 67

Query: 69  VTFGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIV----GVVFMVPILNLL 124
           + FG+GGS + S  L +G     RKA    I+  L+ S  I +V       F+ P+  LL
Sbjct: 68  LMFGVGGSVVASIYLSQGK----RKAANINITQALVFSTFIVLVMSALCFCFVGPLGCLL 123

Query: 125 GTSADIFPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPI 184
           G+S  + P   +Y    L   +F   L      +R +G    AM    + AI NII D I
Sbjct: 124 GSSDRLLPLVIEYMIWYLPFLVFYELLSTGMFFIRLDGSPNYAMMCNAIAAIFNIIFDYI 183

Query: 185 LIIVFNMGIKGAAIATVLSQIIG----VIYILKHQFGKNT---SIKYAMNDFLINLKILK 237
            I  F  G+ GAA AT L  ++G    VIY+ +  F +N     IK ++   ++ L+   
Sbjct: 184 FIFEFGWGMMGAAFATSLGTVVGGLMTVIYLTR--FSRNIHLHRIKLSLKSLMLTLRNGG 241

Query: 238 ETVFIGASEFAKLIISSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGF 297
             + +G S F      + ++ LGN +   + G+  +A + +      ++ M    I Q  
Sbjct: 242 YMIKLGTSAFISEASIACMMFLGNYVFIHHLGEDGVAAFSIACYFFPIIFMVYNAIAQSA 301

Query: 298 QPIVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEVISQGV 357
           QPI+ YN+G GQ +RV +++ LA + T+ +C + F ++     + I     D    +  +
Sbjct: 302 QPIISYNFGAGQPDRVRKALHLA-IRTALICGISFFIITFLCRQNIVSLFIDRSCPAFDI 360

Query: 358 FATRI-FFMFSFLIGAQMTIG-GLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLN 415
               I +F   F+  A   IG G YQS+ + + A II+  R  +F++    +LPL  G+ 
Sbjct: 361 AVNGIPYFGVGFIFFAANMIGIGYYQSIRRGQRATIITLLRGVVFMLIGFFVLPLVLGVP 420

Query: 416 GIWFSFPIGDLLGFTLASGIIFKDR 440
           GIW +  + +LL      GI FKDR
Sbjct: 421 GIWLAVSLAELLTTLYIIGIYFKDR 445