Pairwise Alignments

Query, 955 a.a., leucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 958 a.a., valyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (310), Expect = 4e-32
 Identities = 191/927 (20%), Positives = 343/927 (37%), Gaps = 194/927 (20%)

Query: 13  KSVDLIKIMDKWQKKWTEAKIFEAEHD-SRDKFFITAAFPYLNGVLHAGHLRTFTIPETI 71
           K+ D   I     + W E   F+   D S+  + I    P + G LH GH    TI +T+
Sbjct: 3   KTYDPQSIEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTL 62

Query: 72  ARYQRMKNKNVLWTFGFHVTGTPILGLANQIKERKEDIIWAYNNLHNIPMDELLKLNTPE 131
            RYQRMK KN LW       GT   G+A Q+   ++       + H++  D  +     E
Sbjct: 63  IRYQRMKGKNTLWQ-----VGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFM-----E 112

Query: 132 AIVECFSKKA---TEAFKRMGFSLDWRRNFKTDDKVFSKFIEWQFYKLKEMGHITKGSHP 188
            + E  ++     T+  +RMG S+DW R   T D+  SK ++  F +L E   I +G   
Sbjct: 113 KVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRL 172

Query: 189 VRYCPKCENPVEDHDLLHGEES---TTVEYSLIKFTSKFDGKEIIMPMATLRPETVFGVT 245
           V + PK    + D ++ + E+      + Y L       DGK+  + +AT RPET+ G +
Sbjct: 173 VNWDPKLHTAISDLEVENKEKQGHMWHLRYPLADGELTADGKD-YLEVATTRPETMLGDS 231

Query: 246 NAWVNPNEIYVMAEVHDEIQKLDSEDVDLKYNGIWIIGKECADKLKEQDRKIEILKEIKG 305
              V+P+                    D +Y                             
Sbjct: 232 AVAVHPD--------------------DERYQA--------------------------- 244

Query: 306 SELLGLKIKNPVTKKEVPLLPADFVEMGIGTGCVMSVPAHAPYDYVALRDLGKVEEVGLI 365
             L+G  I  P+  + +P++  D+V+M  GTGCV   PAH   DY    ++GK  ++ + 
Sbjct: 245 --LIGKYILLPIVNRRIPIVADDYVDMAFGTGCVKITPAHDFNDY----EVGKRHKLPMF 298

Query: 366 PLIEIEGYDKYPAKEIVEKLGIKDQNDEELLEQATSKIYKDEFHKGKLNENCGEYTGISV 425
            ++ ++   +  A+ +     I    D  L E+                     Y G+  
Sbjct: 299 NVLTLDAAIRSSAEVVNTDGTINTSLDGSLPER---------------------YAGLDR 337

Query: 426 KDIKEKLTKDYINSNIAEIMYEFSEQKVVCRCGEKCIIKTVKGQWFINYSDENWKKLAHE 485
              ++ +  ++    + E +     +          I   +  QW++  +     K A E
Sbjct: 338 FKARDAIVAEFETLGLLEKIAPHGLKVPYGDRSGVVIEPMLTDQWYVAVAP--MAKTAIE 395

Query: 486 CIDN--MNFAPEGIRQEFHNKVDWMKDKACARKRGLGTILP--FDENWIIESLSDSTIYM 541
            ++N  + F P+     + + +  ++D   +R+   G  +P  +D N  +          
Sbjct: 396 AVENGDIKFVPQQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDTNGKVYVGRTEAEVR 455

Query: 542 AYYTIARFI----NEGLTPEQLIPELFDYVYLGNGNAEEIAKNSKIQAETIEEMRKEFLY 597
           A + I   I    +E +        L+ +  LG               + +E+++     
Sbjct: 456 AKHDIDDAIALRQDEDVLDTWFSSALWTFSTLG-------------WPDNVEDLKT---- 498

Query: 598 YYPLDWRCSAKDLIPNHLTFMIFNHVALF----GREHWP-RGIEINGYVTIE-GKKLSKS 651
           ++P D   +  D+I   +  MI   +       G+   P + + + G +  E G K+SKS
Sbjct: 499 FHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKTVYVTGLIRDEAGNKMSKS 558

Query: 652 KGPVLPVSEV-------------------------------------AENFGADVARFYI 674
           KG VL   ++                                      E  G D  RF +
Sbjct: 559 KGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKIEKSTRKEFENGIEAHGTDALRFTL 618

Query: 675 TTCAELPQDADVKFKEMEKARDNLIKLYDLAVSVM-------------EEESAEKELSLI 721
              A   +D +   K ++  R    KL++ +  V+             + +  E ELSL 
Sbjct: 619 AAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEGQDCGPNSPDYQGGEMELSLA 678

Query: 722 DKWLLHKTYSSINSAETAYEEFQLRKIGLMFYELI--NDLRWY-------KRRGGE---- 768
           D+W++     ++ + +     ++        YE        WY        + G E    
Sbjct: 679 DRWIIDLFNQTVKTYDEHMASYRFDLAANTLYEFTWNQFCDWYLELTKPVLQNGTEAQMR 738

Query: 769 -NNSVLKEVVEIWTKLLSPVTPHLCEEIWEKL----GYAG-FISQEMYPVSKPELINEDL 822
                L  V+E   +L+ P+ P++ E IW+++    G  G  I    +P      ++   
Sbjct: 739 GTRHTLVNVLEAMQRLMHPMMPYITETIWQRVKPLTGVQGDTIMLAPFPAFDAAKVDATA 798

Query: 823 ELGEEFIKSAMEDIRNIKGVAKINPEK 849
               E++K  +  +RNI+    I P K
Sbjct: 799 MADLEWVKQVIVAVRNIRAELNIAPSK 825