Pairwise Alignments

Query, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

Subject, 451 a.a., Metallo-beta-lactamase family protein, RNA-specific from Pseudomonas fluorescens FW300-N2E2

 Score =  181 bits (460), Expect = 5e-50
 Identities = 128/440 (29%), Positives = 220/440 (50%), Gaps = 34/440 (7%)

Query: 180 VRTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVV 239
           +R +FLG +  V  +    +  + RIL+DCG+    +  +   ++D  E  + ++DA+V+
Sbjct: 1   MRMTFLGAAGTVTGSKYLLEHDDQRILIDCGLFQGYKQLRLH-NWDPFELPMRDLDAIVL 59

Query: 240 THAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDYVDITEKE---------GKNV 290
           THAHLDH G++P L R GY GPVY T  T +L+ +L +D   + E+E          K+ 
Sbjct: 60  THAHLDHSGYLPVLVRNGYRGPVYATPATCELVKILLRDSARLQEEEAEYANRKGFSKHA 119

Query: 291 P----YSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNV 346
           P    Y+ +  +  +K   P+ +    +IA  I + +  AGHILG+A      G     +
Sbjct: 120 PAFPLYTREHAERALKLLRPIAFEHPVEIARGITILLRRAGHILGAATVQVQAGG--VTL 177

Query: 347 AYTGDI-KFEASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFLRVIAETIA 405
             +GD+ + E   +  P V +  + + L++ESTYG   D     +  E +   VI  T  
Sbjct: 178 VCSGDLGRPEDPVMFAPKVIE--QADVLLVESTYG---DRRHPHESPEDQLAEVITRTAL 232

Query: 406 RKGKAIIPVFGIGRAQELMLVLEE-GYNQGIFNAPVYLDGMIWEATAIHTAYPEYLSKNM 464
           R+G  ++P F +GRAQ LM  L      + I + P+YL+  +  A  +   Y  +  ++ 
Sbjct: 233 RRGITLVPSFTVGRAQLLMYHLYRLKQRRAIPDIPIYLNSPM--AIDVTRLYQRFGDEHR 290

Query: 465 RNRIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEYFKNLADD 524
            +R   EG    +  +   V++  D   +     P +I+  SGM +GG  + + K+LA +
Sbjct: 291 LSREECEG----MCHIAHPVRSVKDSMALDLQRTPAVIIAASGMATGGRVLHHLKSLAPN 346

Query: 525 EKNSIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGRSKAVKVNLSVHTLEGFSGHSDRKQL 584
             N+++  G+Q+ GT G +I  G   + + GK+     V +N  V  ++  S H+D  ++
Sbjct: 347 PINTLLMPGFQAGGTRGARIVAGEPAVRIHGKD-----VPINAEVVPMQTLSAHADADEI 401

Query: 585 IKYLRKLKPIPDRILTVHGE 604
           +++LR  K  P     VHGE
Sbjct: 402 MQWLRGFKTPPRHTYVVHGE 421