Pairwise Alignments

Query, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

Subject, 558 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 59/269 (21%)

Query: 180 VRTSFLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKA----FPHFDAPEFSIEEID 235
           +R + LGG  E+GR     +     +++DCG+     DE       P     E  +++I+
Sbjct: 16  LRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRLDDIE 75

Query: 236 AVVVTHAHLDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKDY----VDITEKEGKNVP 291
           A+V+TH H DH G IP L +   D PV  +K T  L+    ++Y    V +  +EG++  
Sbjct: 76  ALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITPVFVEVREGQSTR 135

Query: 292 YSSKDIKN-CIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDGLYNVAYTG 350
           +   + +   + H+ P           A+ + ++                 G   + +TG
Sbjct: 136 HGVFECEYFAVNHSTP----------DALAIAVYT----------------GAGTILHTG 169

Query: 351 DIKFE-------------ASRLLEPAVCQFPRLETLIIESTYGGYDDVLPERDETEKEFL 397
           DIKF+              SRL +  V      + L+ +ST      V P   E      
Sbjct: 170 DIKFDQLPPDGRPTDLPGMSRLGDTGV------DLLLCDSTNAEIPGVGPSESEVGPTLH 223

Query: 398 RVIAETIARKGKAIIPVF--GIGRAQELM 424
           R+I       G+ I+  F   + R Q+++
Sbjct: 224 RLIR---GADGRVIVACFASNVDRVQQII 249