Pairwise Alignments

Query, 635 a.a., beta-CASP ribonuclease aCPSF1 from Methanococcus maripaludis S2

Subject, 478 a.a., metallo-beta-lactamase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (420), Expect = 2e-45
 Identities = 128/447 (28%), Positives = 223/447 (49%), Gaps = 43/447 (9%)

Query: 184 FLGGSREVGRTCLYHQTPESRILVDCGINIAVEDEKAFPHFDAPEFSIEEIDAVVVTHAH 243
           FLG +REV  +C         +L+DCG+    + ++   H +   F  + I AVV++HAH
Sbjct: 5   FLGAAREVTGSCHLVTVAGKHLLLDCGLIQGGKADELRNH-EPFVFDPQTIVAVVLSHAH 63

Query: 244 LDHCGFIPGLFRYGYDGPVYCTKPTRDLMTLLQKD----YVDITEKEGKNVP-------- 291
           +DH G +P L + G+DGP+Y  K T +L  ++ KD     V  TE+  K           
Sbjct: 64  IDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAKHDLAPLE 123

Query: 292 --YSSKDIKNCIKHTIPLDYGVTTDIAPAIKLTMHNAGHILGSAIAHCHVGDG--LYNVA 347
             ++ +D +  I   + L+YG  T + P + + + +AGHILGSA+    +G+G     + 
Sbjct: 124 PLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDAGHILGSALVELWLGEGKSQKKIV 183

Query: 348 YTGDIKFEASRLLEPAVCQFPRLETLIIESTYG-----GYDDVLPERDETEKEFLRVIAE 402
           ++GD+      +L+         + +++ESTYG      + D L E  +    F + + E
Sbjct: 184 FSGDLGRAGMPILQNPTL-VDTADLVLMESTYGNRFHRSWTDTLAELKDI---FAKTVNE 239

Query: 403 TIARKGKAIIPVFGIGRAQELMLVLE---EGYNQGIFNAPVYLDG-MIWEATAIH-TAYP 457
           +   +G  ++P F +GRAQEL+ +     + ++ G +   + LD  M  EAT ++   YP
Sbjct: 240 S---QGNILLPAFSVGRAQELLYLFHLYAKEWDLGRWK--ICLDSPMAIEATRVYVNNYP 294

Query: 458 EYLSKNMRNRIFHEGDNPFLSEVFKKVKNTNDRRNIMDSDEPGIILTTSGMLSGGPSVEY 517
                  R    H G +P LS V + ++ T +   + +  +  II+  SGM +GG    +
Sbjct: 295 LMDEDFKRFTRQHPGQHPLLSNV-EFIQTTEESIALNEVHKGLIIIAGSGMCNGGRIRSH 353

Query: 518 FKNLADDEKNSIVFVGYQSEGTLGRKIQKGFKEIPLMGKNGRSKAVKVNLSVHTLEGFSG 577
            ++     +  ++  G+Q+ GT GR +  G KE+ + G      +V V   +HT+ G S 
Sbjct: 354 LEHNLWRSECDVIICGFQALGTPGRALVDGAKELTIHG-----NSVNVAAKLHTVGGLSA 408

Query: 578 HSDRKQLIKYLRKLKPIPDRILTVHGE 604
           H+D+ +L+++ R  +  P  +L VHGE
Sbjct: 409 HADQAELLRWYRHFEEQPPLVL-VHGE 434