Pairwise Alignments

Query, 288 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 288 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  561 bits (1447), Expect = e-165
 Identities = 276/288 (95%), Positives = 282/288 (97%)

Query: 1   MDYFKIFAIFLVLIIPVSASDVVLVSDTVSDCASANIIPTINDSYVVINTSWGVYDDDVL 60
           MDYFKIFAIFLVLIIPVSASDVVLVSDTVSDCASANIIPTINDSYVVINTSWGVYDDDVL
Sbjct: 1   MDYFKIFAIFLVLIIPVSASDVVLVSDTVSDCASANIIPTINDSYVVINTSWGVYDDDVL 60

Query: 61  EQILSENPKNVIIVGGTVAVPSEYDAQLEEAGITVERIYGIDRYQTNKNVILKFKDQIQN 120
           EQI +ENPKNVIIVGGTVAVPSEYD QLEEAGITVERIYGIDRYQTNKNVILKFKDQIQ+
Sbjct: 61  EQISNENPKNVIIVGGTVAVPSEYDTQLEEAGITVERIYGIDRYQTNKNVILKFKDQIQD 120

Query: 121 RNMWIVYGDDDRPEFCNAGDNIVILSNGTALSVDDEDLGDFDPGRVTVMENPVFNSNNVR 180
           RNMWIVYGDDDRPEFCNAG NIVILSNGTALSVDDEDLGDFDPGRVT+MENPVFNSNNV 
Sbjct: 121 RNMWIVYGDDDRPEFCNAGSNIVILSNGTALSVDDEDLGDFDPGRVTIMENPVFNSNNVM 180

Query: 181 ARLENYGFYVSTQSMPESVLNRTVYRKMEQLQLQIETMEQLGINCTPLRNDLTSINNSIR 240
           ARL+N GFYVSTQSMPESVLNRTVYRKMEQLQLQIETMEQLGINCTPLRNDL SINNSIR
Sbjct: 181 ARLQNQGFYVSTQSMPESVLNRTVYRKMEQLQLQIETMEQLGINCTPLRNDLNSINNSIR 240

Query: 241 NQNLEQAYAGELVLERNLLSYKHQNRHVYWDGPKITYNPKNNSPNYNN 288
           NQNLEQAYAGE+VLERNLLSYKHQNRHVYW+GPKITYNPKNNSPNYNN
Sbjct: 241 NQNLEQAYAGEIVLERNLLSYKHQNRHVYWNGPKITYNPKNNSPNYNN 288