Pairwise Alignments

Query, 319 a.a., cell wall-binding protein from Methanococcus maripaludis S2

Subject, 288 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  185 bits (469), Expect = 1e-51
 Identities = 99/265 (37%), Positives = 159/265 (60%), Gaps = 2/265 (0%)

Query: 1   MDIFKKLVLLMIVLMPVSYASDVILVSDNFADKLVAQTIADELDEFVLVESPWGNFSNDT 60
           MD FK   + +++++PVS ASDV+LVSD  +D   A  I    D +V++ + WG + +D 
Sbjct: 1   MDYFKIFAIFLVLIIPVS-ASDVVLVSDTVSDCASANIIPTINDSYVVINTSWGVYDDDV 59

Query: 61  LNEILNESPEDVVIIGGTVAVPENYTTSLENENITVERINGSDRFDTNNITINRFKDLFV 120
           L +I NE+P++V+I+GGTVAVP  Y T LE   ITVERI G DR+ TN   I +FKD   
Sbjct: 60  LEQISNENPKNVIIVGGTVAVPSEYDTQLEEAGITVERIYGIDRYQTNKNVILKFKDQIQ 119

Query: 121 NKSILIVYANGTNDTYGNITNVTFVLTDGNKTSVSEEVMENIS-DNITVLEDAAYNYSGL 179
           ++++ IVY +     + N  +   +L++G   SV +E + +     +T++E+  +N + +
Sbjct: 120 DRNMWIVYGDDDRPEFCNAGSNIVILSNGTALSVDDEDLGDFDPGRVTIMENPVFNSNNV 179

Query: 180 LKRLQNHGFQVSTASMPGNVLKAKIERRMNTIQTTLQALEQNGINISELDTKYGALTDAY 239
           + RLQN GF VST SMP +VL   + R+M  +Q  ++ +EQ GIN + L     ++ ++ 
Sbjct: 180 MARLQNQGFYVSTQSMPESVLNRTVYRKMEQLQLQIETMEQLGINCTPLRNDLNSINNSI 239

Query: 240 DGGNYSYAYALAIQLEDDLKAKQYK 264
              N   AYA  I LE +L + +++
Sbjct: 240 RNQNLEQAYAGEIVLERNLLSYKHQ 264