Pairwise Alignments

Query, 433 a.a., NCS2 family permease from Methanococcus maripaludis S2

Subject, 431 a.a., Permeases from Pseudomonas stutzeri RCH2

 Score =  474 bits (1220), Expect = e-138
 Identities = 236/425 (55%), Positives = 318/425 (74%), Gaps = 2/425 (0%)

Query: 5   LARYFGFEEHKTNFKVETMAGVTTFMTMAYIIFVNPSILSLAGMDFGAVMVATCISAALG 64
           L + F  + H T  + E +AG+TTF+TMAYI+FVNPSIL+  GMD GAV VATC++AA+G
Sbjct: 2   LEKLFQLKAHNTTLRTEVLAGITTFLTMAYILFVNPSILAETGMDHGAVFVATCLAAAIG 61

Query: 65  TFIMGVYAKYPFALAPGMGLNAFFTFGVVMGMGLSWQTALGAVFISGILFILLTLTKIRT 124
           + IMG+ A YP ALAPGMGLNAFFT+ VV+ MG +WQTALGAVF+SG++F  L++ KIR 
Sbjct: 62  SAIMGLVANYPIALAPGMGLNAFFTYTVVLTMGYTWQTALGAVFLSGVIFFGLSIFKIRE 121

Query: 125 WIFDAIPDALKYGTAVGIGLFIAFIGLKSAGVIVANEATLVGLGNVLSPATFLALFGLFA 184
           WI  +IP AL+ G A GIGLF+A I LK+AG++V N ATLVGLG++ +  T LA  G F 
Sbjct: 122 WIIHSIPLALRAGIAAGIGLFLAIIALKNAGIVVDNPATLVGLGDLSAGGTLLACLGFFL 181

Query: 185 TAAMMARKVTGAILWGIILTAVIGMGLGVSALPAGLVAMPPSLAPTLMQMDVMGALSFGL 244
            AA+  R+VTGA++ GI++   + + LG+S L  G+V+MPPSLAPT MQ+D+MGAL  GL
Sbjct: 182 IAALAYRQVTGAVMIGILVVTGLSILLGLSQL-NGVVSMPPSLAPTFMQLDIMGALDIGL 240

Query: 245 INIILAFFFVDLFDTLGTLSALSSQAGYM-KDGKLPKAEKALMSDSVATAVGAALGTSTV 303
           I++I AF FVDLFDT GTL  ++ +A  + KDGK+P+  +AL++DS AT  GAALGTST 
Sbjct: 241 ISVIFAFLFVDLFDTSGTLIGVAQKADLLDKDGKMPRLGRALLADSTATMAGAALGTSTT 300

Query: 304 TSYVESASGIGLGGRTGFVSVVVAALFLLSIFFSPFVAAIPAYATAPALIIVGALMISAI 363
           TSY+ESA+G   GGRTG  + VVA LFLLS+FF+P   A+PAYATAPAL+ V  LM+S++
Sbjct: 301 TSYIESAAGTAAGGRTGLTACVVALLFLLSLFFAPLAGAVPAYATAPALLFVAVLMMSSL 360

Query: 364 KRIDLDDITESVPAFIALITIPLTYSIATGLQLGFIFYPLIKIIAGRSKEVHPIVYLLAI 423
             ID DD+T + P  +A + +PLT+SIA G+  GFI +  IK++AGR +E+ P +++L+ 
Sbjct: 361 ANIDWDDLTVAAPVVVAALAMPLTFSIANGIAFGFIAWTAIKLLAGRWRELSPAMWILSA 420

Query: 424 IFAAR 428
           +F  +
Sbjct: 421 LFVVK 425