Pairwise Alignments

Query, 433 a.a., NCS2 family permease from Methanococcus maripaludis S2

Subject, 450 a.a., xanthine/uracil permease family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (749), Expect = 1e-83
 Identities = 163/435 (37%), Positives = 256/435 (58%), Gaps = 6/435 (1%)

Query: 3   NFLARYFGFEEHKTNFKVETMAGVTTFMTMAYIIFVNPSILSLAGMDFGAVMVATCISAA 62
           +FL R+F  ++  +  + E +AG+TTF+ M Y + V P++L  AG D GAV VATC+ AA
Sbjct: 14  SFLNRFFSIQQRGSTVRQEVIAGLTTFLAMVYSVIVVPNMLGKAGFDPGAVFVATCLIAA 73

Query: 63  LGTFIMGVYAKYPFALAPGMGLNAFFTFGVVMGMGLSWQTALGAVFISGILFILLTLTKI 122
            G+ +MG++A  P A+   + L AF  FG+V+G G+S    LGA+F  G++F ++++T I
Sbjct: 74  FGSLLMGLWANLPMAIGCAISLTAFTAFGLVLGQGMSIPVTLGAIFWMGVIFTIVSVTGI 133

Query: 123 RTWIFDAIPDALKYGTAVGIGLFIAFIGLKSAGVIVANEATL-VGLGNVLSPATFLALFG 181
           R W+   +P  + +GT +GIGLF+  I   S  +IVAN+A L V LG++ S      + G
Sbjct: 134 RQWVLANLPKGIAHGTGIGIGLFLLLIATNSVQLIVANDAGLPVKLGDINSLPVIATVVG 193

Query: 182 LFATAAMMARKVTGAILWGIILTAVIGMGLGVSALPAGLVAMP--PSLAPTLMQMDVMGA 239
           L AT  +  R V G IL  II  ++ G+    S    GL A+P   S    + Q+D+MGA
Sbjct: 194 LAATIGLERRGVPGGILLVIIGLSLFGLVFDPSVKYQGLFALPNLTSEHSLIGQLDIMGA 253

Query: 240 LSFGLINIILAFFFVDLFDTLGTLSALSSQAGYM-KDGKLPKAEKALMSDSVATAVGAAL 298
           L+  ++ I+LA     +FD  GT+ A++ QA  + KD  +    KAL SDSV++     +
Sbjct: 254 LNPVVLPIVLALVMTAIFDATGTIRAVAGQANLLDKDDNIVGGGKALTSDSVSSMFAGVV 313

Query: 299 GTSTVTSYVESASGIGLGGRTGFVSVVVAALFLLSIFFSPFVAAIPAYATAPALIIVGAL 358
           G +    Y+ESA+G   GG+TG  + +V  LFLL +F +P    +PAYATAPAL+ VG L
Sbjct: 314 GGAPAAVYIESAAGTAAGGKTGLTATIVGVLFLLMVFLAPLSYLVPAYATAPALMYVGLL 373

Query: 359 MISAIKRIDLDDITESVPAFIALITIPLTYSIATGLQLGFIFYPLIKIIAGRSKEVHPIV 418
           M+S + ++D +D  +++      + I L+ +I TG+ LGF+   + +I +G  +++   +
Sbjct: 374 MLSNVTKLDFNDKVDAMAGLTCAVFIILSCNIVTGIMLGFVTLVIGRIFSGEWRQLK--L 431

Query: 419 YLLAIIFAARFVYIG 433
            +LAI       Y+G
Sbjct: 432 GVLAITLGLVVFYMG 446