Pairwise Alignments

Query, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

Subject, 457 a.a., signal recognition particle protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  182 bits (462), Expect = 2e-50
 Identities = 103/293 (35%), Positives = 169/293 (57%), Gaps = 8/293 (2%)

Query: 78  VTKSIKKVLGKDVILTEDDIEDVLEEMEMELFEADVAFDVVEKIIESLKNQLVGLKISAK 137
           +++++K + G+   LTED+I+D L E+ M L EADVA  VV + + ++K + VG  ++  
Sbjct: 9   LSRTLKTISGRGR-LTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAVGQDVAKS 67

Query: 138 DDPEEITINALKKSIKGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLA 197
             P ++ +  ++  ++  + +   +  NL     A   PAV++  G+ G GKTTS++KL+
Sbjct: 68  LTPGQVFVKIVQSELEKAMGEAN-EALNL-----AAQPPAVIMMAGLQGAGKTTSVAKLS 121

Query: 198 YILKEKGYSAVMA-AGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYDAISHAKA 256
             L+ +   +V+  + D +R  AI+QLE   K   ++            +   AISHAK 
Sbjct: 122 KFLRTRQKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIANAAISHAKL 181

Query: 257 KGLNVVLADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEEFNNTIN 316
           K ++VV+ DTAGR   +  +MDEIK +    KP   +FV D++ G DA + A+ FN  + 
Sbjct: 182 KFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEALP 241

Query: 317 INGAILTKTDADAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKL 369
           + G +LTK D DA+GGAALSI +  GKPI F+GVG++   L+ F  D +  ++
Sbjct: 242 LTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRI 294