Pairwise Alignments

Query, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

Subject, 525 a.a., Probable signal recognition particle protein Ffh (fifty-four homolog) (SRP protein) from Mycobacterium tuberculosis H37Rv

 Score =  156 bits (395), Expect = 1e-42
 Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 14/299 (4%)

Query: 78  VTKSIKKVLGKDVILTEDDIEDVLEEMEMELFEADVAFDVVEKIIESLKNQLVGLKISAK 137
           +T +++ + GK   LT+ DI+    E+ + L EADV+  VV   I  +K +  G ++S+ 
Sbjct: 9   LTAALQGLRGKGR-LTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSA 67

Query: 138 DDPEEITINALKKSIKGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKTTSISKLA 197
            +P +  +  + + +  IL  E  ++        A   P V++  G+ G+GKTT   KLA
Sbjct: 68  LNPAQQVVKIVNEELISILGGETREL------AFAKTPPTVVMLAGLQGSGKTTLAGKLA 121

Query: 198 YILKEKGYSAVMAAGDTFRAGAIEQLEEHGKNTGIKVIKHQKGA-------DSAAVIYDA 250
             L+ +G++ ++ A D  R  A+ QL+  G+  G+ V     GA       D  AV    
Sbjct: 122 ARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESGPGDPVAVAAAG 181

Query: 251 ISHAKAKGLNVVLADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAEE 310
           ++ A+AK  +VV+ DTAGR   +  LM +   +     PD ++FV D++ G DA++ A  
Sbjct: 182 LAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAA 241

Query: 311 FNNTININGAILTKTDADAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKL 369
           F   +   G  LTK D DA+GGAALS+    G PILF   G++  D   F  D M  ++
Sbjct: 242 FGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILFASTGEKLEDFDVFHPDRMASRI 300