Pairwise Alignments

Query, 383 a.a., signal recognition particle-docking protein FtsY from Methanococcus maripaludis S2

Subject, 456 a.a., signal recognition particle protein from Herbaspirillum seropedicae SmR1

 Score =  155 bits (391), Expect = 3e-42
 Identities = 95/300 (31%), Positives = 158/300 (52%), Gaps = 6/300 (2%)

Query: 73  LDKLA--VTKSIKKVLGKDVILTEDDIEDVLEEMEMELFEADVAFDVVEKIIESLKNQLV 130
           LD L   + K +K + G +  LTE +  ++L E+ + L EADVA   V + I  +K + +
Sbjct: 2   LDNLTQRLAKVVKTMRG-EARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60

Query: 131 GLKISAKDDPEEITINALKKSIKGILSQEKIDVFNLIDEKKANGEPAVLLFVGINGTGKT 190
           G ++     P +  +  +++ +  ++  +     + ++   A   PA++L  G+ G GKT
Sbjct: 61  GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNF--ATQPPAIILMAGLQGAGKT 118

Query: 191 TSISKLAYILKEKGYSAVMA-AGDTFRAGAIEQLEEHGKNTGIKVIKHQKGADSAAVIYD 249
           T++ KLA  L+E     V+  + D +R  AI QLE      G      Q       +   
Sbjct: 119 TTVGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALA 178

Query: 250 AISHAKAKGLNVVLADTAGRQTTNINLMDEIKKVVRVTKPDLIIFVGDSLAGNDAISQAE 309
           A+ +AK     V++ DTAGR   +  +MDEI+ V    KP   +FV D++ G DAI+ A+
Sbjct: 179 ALDYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAK 238

Query: 310 EFNNTININGAILTKTDADAKGGAALSIAYSIGKPILFMGVGQRYSDLQEFDVDWMIKKL 369
            F++ + + G +LTK D D++GGAALS+ +  GKPI F GV ++   L+ FD   M  ++
Sbjct: 239 AFSDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRI 298