Pairwise Alignments

Query, 188 a.a., ECF transporter S component from Methanococcus maripaludis S2

Subject, 186 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 87.8 bits (216), Expect = 1e-22
 Identities = 52/178 (29%), Positives = 97/178 (54%), Gaps = 2/178 (1%)

Query: 9   ITAFGISINVLGGFVATFYDLPIFLNNLGTILCGLLLGPAGGALTGLFSNLIIGSTVNSV 68
           I  F I +NV G ++ + Y  P++L+++GTI   ++LGP  GAL GL +NLI G  ++  
Sbjct: 10  ILMFSIGLNVFGTYLESIYLFPLYLDSIGTIFSAIILGPHIGALVGLITNLITGCLLSEE 69

Query: 69  YIPFTIVNVVVGFVAGYAAIKHDREFTSMLVHAFLISIIALCLVIPIEMFIFGGPLDQTI 128
              F++VNV++G   G    K+     ++ + A ++SI++  +   + ++ FGG + +  
Sbjct: 70  NFLFSVVNVLIGLTTGILLYKNQINIKNIFLAAIVVSIVSSIMGNLLSIYFFGG-ITEGG 128

Query: 129 LSYATTINLNTGLNISAAIYFAEFPLMIADIVLSAIWAYVVLMLLPKKV-LDILKINN 185
           + + T      G +I  A + A      AD ++S I A+ ++ +L  K+ +  LK+ N
Sbjct: 129 VGHITQTLTAFGESIPTAAFAAGLYTNFADKIISFISAFFMIYVLQDKLSIYNLKLGN 186